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CRISPRs details
NZ_CP016410_2
Flanking alignement tool
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NZ_CP016410_2                                                                                                                 
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Strain :
Salmonella enterica subsp. enterica serovar Infantis GCF_001931595
RefSeq :
NZ_CP016410 (chromosome circular)
CRISPR id :
NZ_CP016410_2
DR consensus (29 bp) :
CGGTTTATCCCCGCTGGCGCGGGGAACAC
Number of repetitions :
31
Begin Position :
3518867
End Position :
3520763
3518867
GTGTTTATCCCCGCTGACGCGGGGAACAT
TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
3518927
3518928
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACCGACAGCCAGGTGACGAACGCCACCAACGA
3518988
3518989
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGGTTCATGACGTATAAGCTCATATACCCTGT
3519049
3519050
CGGTTTATCCCCGCTGCAGCGCTGTTTAA
ATGGCTGGCCGCGGTTTATCCCCGCTGGCGCGGGGAACACTGGGGTTACCTGCACTCCAGTCCCGGCAGGTA
3519150
3519151
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ATCAGCGGCACTATCAGCCCAATTTATAAGAC
3519211
3519212
CGGTTTATCCCCGCTAGCGCGGGGAACAC
TGTTGCTGCCATTGCGGCGCAGCCCTGCCAAG
3519272
3519273
CGGTTTATCCCCGCTAGCGCGGGGAACAC
GTTAACTATTACGATCCAACGCATAACAACAG
3519333
3519334
CGGTTTATCCCCGCTAGCGCGGGGAACAC
TGCTGCCAGCGTGAAATATAATTCTGCAATCT
3519394
3519395
CGGTTTATCCCCGCTAGCGCGGGGAACAC
ATTTCGTACCCGTCTTCATTAATCCAATCCTG
3519455
3519456
CGGTTTATCCCCGCTAGCGCGGGGAACAC
TTTTCGCCACAAAAAACGATCCCGTCGCCGTT
3519516
3519517
CGGTTTATCCCCGCTAGCGCGGGGAACAC
CAACCCCGCCGCCGCCTGTATTTAACAAG
3519574
3519575
GGGTTTATCCCCGCTAGCGCGGGGAACAC
CGAAACAGGAAACTAAATAAATGAACGAAACG
3519635
3519636
CGGTTTATCCCCGCTAGCGCGGGGAACAC
GACGGTGGAAATCGCTATTGTCCGCGAGATGT
3519696
3519697
CGGTTTATCCCCGCTAGCGCGGGGAACAC
ACGATCCATTTTTTCAGGTCGAATAAAACGCC
3519757
3519758
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCACCGCCACCGGTGCGGCTGGCCGTCTCCTG
3519818
3519819
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACGCCCGGCACCGTTGCCAGTCCCTGCGCTAC
3519879
3519880
AGGTTTATCCCCGCTGGCGCGGGGAACAC
GTCGTTACCATTGCGTCATAGGCGCGGATCAC
3519940
3519941
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCAGGCGGCCATCTCGACCCCCGGCAATAGAG
3520001
3520002
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACGGCGGTGAAAACTCGGGCAAAACGGCATTG
3520062
3520063
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCTCACGCGGCCTTTTTATTTTGCTACTGTAT
3520123
3520124
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AGATTTCACAGGTACGCATCGAGTAATTTATG
3520184
3520185
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GATTTTGTTCGCTACGTCGCCAGCCATGCCAA
3520245
3520246
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TTGGTCATGGTTGAGACAAACGGGCCTGGTAG
3520306
3520307
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCGCCTTCAGGAAGAAACCTACATCGAACACG
3520367
3520368
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CTGCAATTCGCGTTCTCTGGCCTGTTTCGCCA
3520428
3520429
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCTGACATGGAAACCGTCGCCGGCAATTGGGC
3520489
3520490
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCGGAGAATTATATATCGGAATGTTACAGGAAA
3520551
3520552
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTTAAATACAATTCGCCCGCCATTAAAATCAA
3520612
3520613
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GATGAATTCAGGGGGCCAGTTTTTGTAAAAAT
3520673
3520674
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGGTTGAGGGGCTTTATATAGTGGTATTCCGC
3520734
3520735
CGGTTTATCCCCGCTGGCGCGGGGAACAC
3520763
Left flanking sequence : Till position 3518867 (length
bp)
GGCGGATTGAGCGCCGTAGCCGCGATGTAGTGCGGATAATGCTGCCGTTGGTAAAAGAGCTGGCGAAGGC
GGAAAAAACGTCCTGATATGCTGGTGAAAC
Right flanking sequence : From position 3520763 (length
bp)
ACTAAAACTATATATTTGTTCTAAAAGCCCTTTTTTACTACATAACAAACTACCAACGGTAAGATAACAA
TTCCTTATTATTAAAGAACATTCAACTTAT
Print the CRISPR sequence : From position
bp To position
bp