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CRISPRs details
NZ_CP016412_1
Flanking alignement tool
Page manual
  
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NZ_CP016412_1                                                                                                                 
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Strain :
Salmonella enterica subsp. enterica serovar Infantis GCF_001931615
RefSeq :
NZ_CP016412 (chromosome circular)
CRISPR id :
NZ_CP016412_1
DR consensus (29 bp) :
GTGTTCCCCGCGCCAGCGGGGATAAACCG
Number of repetitions :
27
Begin Position :
1229509
End Position :
1231125
1229509
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TCGTACACCAGCGCTTTACCGGAGTGTCCGTGC
1229570
1229571
GTGTTCCCCGCGCCAGCGGGGATAAACCG
ATCAAATATCAGATAACCCCCGTCGGCAAACC
1229631
1229632
GTGTTCCCCGCGCCAGCGGGGATAAACCG
ATCACATTCCTGAAAAATGACTCCCTTAGCGA
1229692
1229693
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GAAGATATTGAAAGCGCCCAATCTTCCCAGCT
1229753
1229754
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TCCAGCATTGACGCGAACCCTGCGCCGCTGGC
1229814
1229815
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GCTGAAATATTGCTATTTCCGAAGGGGCTGAT
1229875
1229876
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TCCCGCCTGAACAAAATCGACCACGTTATTAA
1229936
1229937
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GCTCCCGCGGGCGCTCCTGTTGGCCAGCATCA
1229997
1229998
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTCCAATACGAGCTGAGTGCGCACGCCCTTA
1230058
1230059
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CAGATCGACCGCCTGGAGGTTGAGGTGGTTGG
1230119
1230120
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GCGTGGATTGATTCTGATCGCCGTGGGCGGGC
1230180
1230181
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GAAACAGAGATCGCGTCCGATAATGCCGACAT
1230241
1230242
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AGAATATTCAACTCCAGCGGGAAAAAGACGCA
1230302
1230303
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AACTTTCATCAAACTGGATCGAAGGGCCACTT
1230363
1230364
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCGGTTTTAGCTCGCTGGAAACCTCGCTTTTG
1230424
1230425
GTGTTCCCCGCGCCAGCGGGGATAAACCG
ACGCCGAGGGTGAATATTTAGACCGGGACGCA
1230485
1230486
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GGATCATCAATGTGGGAAGTTATCACAACGGA
1230546
1230547
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGAAATTCAGCGTCTGGAATGCAAGGATTTTGT
1230608
1230609
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GCTATATCCCCGAATCGTGCGCTACGTGAAAA
1230669
1230670
GTGTTCCCCGCGCCAGCGGGGATAAACCG
ACGAGGTCATTTTCAGCACTCGTCAGGCGCTG
1230730
1230731
GTGTTCCCCGCGCCAGCGGGGATAAACCG
ATGCCCTGTTCGGCAAAATCCCGCCACGCTGG
1230791
1230792
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TAAAACCGGTGCTGGATTTTGATGAAGACGAA
1230852
1230853
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCATTCAACATCGCACTTAAGAACTTGTGCCA
1230913
1230914
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGATATTTATCCAGACTGTCGGACAGGGTGGT
1230974
1230975
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCTCATCGGGAGCCAACGCCGCGAGAATACGC
1231035
1231036
GTGTTCCCCGCGCCAGCGGGGATAAACCC
AGCACAATCATTATTAGATGAACTTTCATCAA
1231096
1231097
GTGTTCCCCGCGCCAACAAGGATAGCCGT
1231125
Left flanking sequence : Till position 1229509 (length
bp)
AGCAAATTAGCTGTTCTTTAATAATTTAAATTGTTGCGATTATGTTGGTGGAATGTGGTGCTGATAAAAA
ACAGTTTATAAACAACAATATACGTTTAGT
Right flanking sequence : From position 1231125 (length
bp)
TGCATAATCATAATCTGTGTACCAGTAATGGCTGCTACAAACCTGTAAAGTAAAAAGGCCGCGTTTTTCC
GGGGAGGCTTTTATACAGGAGAAGGCCATG
Print the CRISPR sequence : From position
bp To position
bp