CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NZ_CP016561_3
Flanking alignement tool
Page manual
  
Home Page
NZ_CP016561_3                                                                                                                 
top
Strain :
Salmonella enterica subsp. enterica serovar Heidelberg GCF_001692555
RefSeq :
NZ_CP016561 (chromosome circular)
CRISPR id :
NZ_CP016561_3
DR consensus (29 bp) :
CGGTTTATCCCCGCTGGCGCGGGGAACAC
Number of repetitions :
19
Begin Position :
3004968
End Position :
3006100
3004968
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTTACGTTCGGTAAATGGAAAGCGGCGAATAT
3005028
3005029
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CCAGAAAGTGCCGGTAGTGCCTGATGAACGAC
3005089
3005090
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CGCGCCCACTTCCGTAAAATACAGATAATCCA
3005150
3005151
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACCGTTCCGGTATGATCGAAGATACGGCAAAC
3005211
3005212
CGGTTTATCCCCGCTGGCGCGGAGAACAC
GGCAGCGGGCGAGGCAAACACATTCGGGGCGT
3005272
3005273
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGTAATTTCTCATCTAACAGCCTGTACGCCTC
3005333
3005334
AGGTTTATCCCCGCTGGCGCGGGGAACAC
GAATCTAATGCAACAGATGAATAAACACGTAA
3005394
3005395
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCTTTATCGTCAATGCGAAATTTTCCGCGACG
3005455
3005456
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCCCATTCACCAACAACAATATCGCCCTGCAA
3005516
3005517
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CGTTGCGTCAGGTTGATCCAGTGCGTCAGCGG
3005577
3005578
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGATGAAATCGTCAATAAAATTATTGGCGCGC
3005638
3005639
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACCACCGGAGCCATCGCCCAACACAGAGCCGC
3005699
3005700
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGCAAACCCGCAAGGCCCGTATATGGATTTAA
3005760
3005761
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AACCAATCCAGGCGATAAGAGGCGATTAAAGG
3005821
3005822
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCTCGGTCTCGGTCTCGGTCTCGGTCTCGGTAGTGACG
3005888
3005889
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ATTTTATTTGACAAATTGGCGGCATCTCACTG
3005949
3005950
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CACCACACATAATGATTACTCCACTACCCAGC
3006010
3006011
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACTGCTTATCATTGATTTTATTGATTTTTCCC
3006071
3006072
CGGTTTATCCCCGCTGGCGCGGGGAACAC
3006100
Left flanking sequence : Till position 3004968 (length
bp)
TTTATCCCCGCTGGCGCGGGGAACACGATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAA
TTAAAGCCGAGGGTGGCACCGCGCCTTATT
Right flanking sequence : From position 3006100 (length
bp)
ACTAAAACTATATATTTGTTCTAAAAGCCCTTTTTTACTACATAACAAACTACCAACGGTAAGATAACAA
TTCCTTATTATTAAAGAACATTCAACTTAT
Print the CRISPR sequence : From position
bp To position
bp