Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP016876_2                                                                                                                 top


Strain : Legionella pneumophila subsp. pneumophila GCF_001766375 RefSeq :NZ_CP016876 (chromosome circular)
CRISPR id : NZ_CP016876_2
DR consensus (28 bp) : GTTCACTGCCGCACAGGCAGCTTAGAAANumber of repetitions :56
Begin Position : 1345059 End Position : 1348388

1345059GTTCACTGCCGCACAGGCAGCTTAGAAATGCCACCAGGATTATGCCCAAAAGCAAACAGG1345118
1345119GTTCACTGCCGCACAGGCAGCTTAGAAAATGATGCCCGACACATCATCATATAAATGATA1345178
1345179GTTCACTGCCGCACAGGCAGCTTAGAAAATCAGGTGGCTTGATTACCTTGGTCACTCCTG1345238
1345239GTTCACTGCCGCACAGGCAGCTTAGAAAAGATAAATGTCTCTCAACGGCTCAGAGTCTAA1345298
1345299GTTCACTGCCGCACAGGCAGCTTAGAAATCTTCAAATCCTTCATCATCAATCCCAGTTTT1345358
1345359GTTCACTGCCGCACAGGCAGCTTAGAAAAGTCTGGAACACCAAGTGCTACTGAAGCAAGA1345418
1345419GTTCACTGCCGCACAGGCAGCTTAGAAATAATTGAAATAACTTCTGTCCTATGTTGATTC1345478
1345479GTTCACTGCCGCACAGGCAGCTTAGAAAAGTAGAGGCAGCATTCACTGGATTAATAAATG1345538
1345539GTTCACTGCCGCACAGGCAGCTTAGAAAAAAGGCATTCAATATCGACATGATGCTTTTTA1345598
1345599GTTCACTGCCGCACAGGCAGCTTAGAAATATTCATTCCGTGTTCTCTAAGAGCATAATAA1345658
1345659GTTCACTGCCGCACAGGCAGCTTAGAAATTTTACCGAGCAAATAAAACAATATATCCAAT1345718
1345719GTTCACTGCCGCACAGGCAGCTTAGAAAAGCAAAAATAGCTATAGATAAATGCGTCAAGG1345778
1345779GTTCACTGCCGCACAGGCAGCTTAGAAAATATCGCATATGATATCCGCTATTTCTTGATT1345838
1345839GTTCACTGCCGCACAGGCAGCTTAGAAATTTCCAGTAGCTTTCTTTCTATCTTTTTTATT1345898
1345899GTTCACTGCCGCACAGGCAGCTTAGAAAATCGCCTGATATAGCGGACGCTCTTGCAAATA1345958
1345959GTTCACTGCCGCACAGGCAGCTTAGAAAGTCCATTCTTGCGTTTCCGTCCTTGTCGTATG1346018
1346019GTTCACTGCCGCACAGGCAGCTTAGAAAAACGATGAAATTCATTTAAACGAAGACGAAGT1346078
1346079GTTCACTGCCGCACAGGCAGCTTAGAAATACCGCTACAGTTCGAGAGCTTGTACTTCGAA1346138
1346139GTTCACTGCCGCACAGGCAGCTTAGAAATACAGTTAGAGCAGCGTATTAACATAATTTAC1346198
1346199GTTCACTGCCGCACAGGCAGCTTAGAAACTGAGTCCTCAGCAAAAACATTAACATTTTCT1346258
1346259GTTCACTGCCGCACAGGCAGCTTAGAAAAGTGTCATAACCTGCTTAGTTCCCCTACAGTT1346318
1346319GTTCACTGCCGCACAGGCAGCTTAGAAACAAGGACTATTTCAAGCAGTCGGGGAGCAGGA1346378
1346379GTTCACTGCCGCACAGGCAGCTTAGAAATATTACCAGTCACGATACTAGGTTCCCTAGTC1346438
1346439GTTCACTGCCGCACAGGCAGCTTAGAAAATGAACTGCCAATGGAAGCCCAAGAAAAAATC1346498
1346499GTTCACTGCCGCACAGGCAGCTTAGAAATTAATTATAGTGCTGTTATCGGCCACTGTTTC1346558
1346559GTTCACTGCCGCACAGGCAGCTTAGAAAATTCGAAGTACAAGCTCTCGAACTGTAGCAGT1346618
1346619GTTCACTGCCGCACAGGCAGCTTAGAAATTGTCTCTCAGCAAATAATCTTTTTAGTAGAT1346678
1346679GTTCACTGCCGCACAGGCAGCTTAGAAACAATATTGGCATAAGCAACAACAAAAAGACGA1346738
1346739GTTCACTGCCGCACAGGCAGCTTAGAAAATGCATCTGGGCGTTTGGATAAGCTTCTTGAT1346798
1346799GTTCACTGCCGCACAGGCAGCTTAGAAAGAGCGAAACTTCTAAATTTTCGACATCTAATA1346858
1346859GTTCACTGCCGCACAGGCAGCTTAGAAAATTGCAAAAACTGAAAAAACCTATACCCAGGA1346918
1346919GTTCACTGCCGCACAGGCAGCTTAGAAAGATAGCATAACCTGAATCAATTGATTCAAATT1346978
1346979GTTCACTGCCGCACAGGCAGCTTAGAAATCTTTCGTTGCGTCTTTCAACAGCCACGCCAG1347038
1347039GTTCACTGCCGCACAGGCAGCTTAGAAATATAGAGGTTAAGCCTGAGCATTTACCTTCAG1347098
1347099GTTCACTGCCGCACAGGCAGCTTAGAAATTTAGAAGGAGAAGCAAAAACAGACGAACCGG1347158
1347159GTTCACTGCCGCACAGGCAGCTTAGAAAATAGGCGAGAATGACCGATGTGTAATTATAAG1347218
1347219ATTCACTGCCGCACAGGCAGCTTAGAAAAACCGAGATAGCCAAAAAGAACTTAAATTTGA1347278
1347279GTTCACTGCCGCACAGGCAGCTTAGAAATAAGTCTGTTTGCAAAGTCACTATTTGACATG1347338
1347339GTTCACTGCCGCACAGGCAGCTTAGAAAACAATAGTGTCATAGTCAAAAAATTTCTTAAT1347398
1347399GTTCACTGCCGCACAGGCAGCTTAGAAATTCAGCTAAGGCTTTTTTATTAAAACTTAAAT1347458
1347459GTTCACTGCCGCACAGGCAGCTTAGAAAATGATATCGCCAAGGCTTATTGAGTGGACAGA1347518
1347519GTTCACTGCCGCACAGGCAGCTTAGAAAATCCTTCGAGAGGAAGGAATCCCTCCGTATGC1347578
1347579GTTCACTGCCGCACAGGCAGCTTAGAAAAAAGGAGGCAATCAAAGCGCTACCCATATGAG1347638
1347639GTTCACTGCCGCACAGGCAGCTTAGAAATTTTCTCAAGTAAGCCGCAGGATACTTTATGT1347698
1347699GTTCACTGCCGCACAGGCAGCTTAGAAATTCAAACGGCGGTGACATTTCTTCTGGTTTTA1347758
1347759GTTCACTGCCGCACAGGCAGCTTAGAAATAAAATCGAAGCAAGGTGATGTTATTGGTGTT1347818
1347819GTTCACTGCCGCACAGGCAGCTTAGAAACGCCCCAGGGCCAGCAAATAAATTAATTATCT1347878
1347879GTTCACTGCCGCACAGGCAGCTTAGAAATAAAGACGTGTTGGCTCTAATTCTACCGAATA1347938
1347939GTTCACTGCCGCACAGGCAGCTTAGAAATAAACAAGGATGTGAAGTTAGATTTTTTTCTA1347998
1347999GTTCACTGCCGCACAGGCAGCTTAGAAAATATGGCCAAAGTTGTTCCAAAACATCAGAAC1348058
1348059GTTCACTGCCGCACAGGCAGCTTAGAAAAGACAACCAGGCCAAAACCCAAATTTCCAATT1348118
1348119GTTCACTGCCGCACAGGCAGCTTAGAAAGAAGGCGCAAAGATTAGATACGGATCGCAGCAT1348179
1348180GTTCACTGCCGCACAGGCAGCTTAGAAAAATGACAAAAATCATATCAATAAATAAAAACA1348239
1348240GTTCACTGCCGCACAGGCAGCTTAGAAAATTCATCGCTTGACCAATAGAAAGGTTCATCT1348299
1348300GTTCACTGCCGCACAGGCAGCTTAGAAAGATTCGATACATTTTTTAACTCGTCGCCCCAGT1348360
1348361GTTCACTGCCGCACAGGCAGCTTAGAAG1348388
Left flanking sequence : Till position 1345059 (length bp)
TTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGT
TGTAACTATTTTTTTAAGATTTATATTACA
Right flanking sequence : From position 1348388 (length bp)
TTATTATGTTAAAGGTATTGGCACGCTACGTAGCAAGGTCAGGCCTTGGTACGACCTTGTTTTGATTAGG
AAAGTCTAATTATGACTATAATCTCCATTT
Print the CRISPR sequence : From position bp To position bp