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CRISPRs details
NZ_CP019286_2
Flanking alignement tool
Page manual
  
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NZ_CP019286_2                                                                                                                 
top
Strain :
Halobiforma lacisalsi AJ5 GCF_000226975
RefSeq :
NZ_CP019286 (plasmid pHLAJ5I circ)
CRISPR id :
NZ_CP019286_2
DR consensus (30 bp) :
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
Number of repetitions :
24
Begin Position :
78633
End Position :
80163
78633
GTTTCAATCCCACAAGGGTTCGTCTGAAAC
CGCGTTCACGCCCTGAAGGTCCCGAATCGGGTCTTC
78698
78699
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
CGAGCAACTGCAACTCGAGTACCGCGACGCCGA
78761
78762
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
TCTGGTCGTCTTGGCTAATCGGAACGTCGCCCTTCTTG
78829
78830
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
AATTACTCACGAAAACGAGGTTCCAGGGGGCCGA
78893
78894
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
GCGGAGGTTCCGCTGGAGTGGACGTCGATCGAGGT
78958
78959
ACTTCAATCCCACAAGGGTTCGTCTGAAAC
AGGTCTCGGGGAGTTCCTCGAGCGGGGCCTCGTCAGG
79025
79026
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
GATCAGGATCCAGCCGCCGTCGCTTCGCGGCTC
79088
79089
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
CCTGCTCGGGGGCTCCGGAGTCGTAGAGGTAAAGGTC
79155
79156
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
GCCGTTCTCCATCCGCCGTGTACGGCGTACTCGA
79219
79220
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
GCGCGCTGTTGGTCGCCCAGTACATCGGCGTCGAACT
79286
79287
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
TGCTCCGACTCTCCCGGCCCGTCGCCGTCGTCGAC
79351
79352
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
GAGCACGCCCCGACGGGTGCCGGGGGACTTGCGC
79415
79416
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
GCAGGCGTCGAGGGTGGCGAGGCCGTGCGCGGGCTC
79481
79482
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
ACGCGGATCTATCTGCGAGTGTTCATCGTCGTCGAT
79547
79548
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
AAAACGTTCAATCCGACTTACCCCGGCGGAGACGT
79612
79613
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
CGCCCCTGGTGTCGACCGCGCAGTGGGAGAGAAC
79676
79677
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
AACGACAATCTGGCGCATCCAGTACGCTACTTCCGA
79742
79743
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
GTTCATGGAGTCGAACGCGCACTACGACCGGCGTGC
79808
79809
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
GCACGGCCAACTGAGCGCACGCATCGTCGAAGAGGG
79874
79875
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
CCGCCCCCGAAATCAGGACGTGCGCGCCGTCTTCGAG
79941
79942
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
ACAGGCACATGAGCACGAGACAAGGATCGGCGTC
80005
80006
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
AGGCCGTCGCCGTCATCCATCCGACGCACAACGA
80069
80070
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
TCCCGACGACGAGGAGGTGACCGCCTAATGGCGA
80133
80134
GCTTCAATCCCACAAGGGTTCGTCTGAAAC
80163
Left flanking sequence : Till position 78633 (length
bp)
TTTTCAGAAGAAAAACAGAGAAATGGCTCTGGTCTATTCTTCAATTCCAGAAAGCCTGACTAAACTGAGG
GTCGACATAGTGATCTCAATCCGGCGATCG
Right flanking sequence : From position 80163 (length
bp)
CCACCGACATTCTGGTGGACGAGCGAATAATACGGGCGATTTCACAAAGTCATTTCCATCGACCCTCAAT
TCCCCTTCTACCCCCAGGGGGTCGATGGAA
Print the CRISPR sequence : From position
bp To position
bp