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CRISPRs details
NZ_CP019442_2
Flanking alignement tool
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NZ_CP019442_2                                                                                                                 
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Strain :
Salmonella enterica subsp. enterica serovar Typhimurium GCF_001989635
RefSeq :
NZ_CP019442 (chromosome circular)
CRISPR id :
NZ_CP019442_2
DR consensus (29 bp) :
GTGTTCCCCGCGCCAGCGGGGATAAACCG
Number of repetitions :
25
Begin Position :
2879239
End Position :
2880732
2879239
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTTTGATACGTAGTATTCATTACGCCTCCTAG
2879299
2879300
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GCGAGGTCAATAAAAAATGGTGTGGCTTTACC
2879360
2879361
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCGGCATCAGCGCCGATCCGTTCATAGTGCCC
2879421
2879422
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AAAAAACAGAAGAACGGCAAGCGGCACCTCAA
2879482
2879483
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTCAGCGCGGTATTGAGGCCGGGGACCGCCC
2879543
2879544
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
2879604
2879605
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CAGATCCTCAACGGTCAGGCTGTTTAGTTCCT
2879665
2879666
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGGAGGATGGAATATTTCCGAGGCTGGCGATT
2879726
2879727
GTGTTCCCCGCGCTAGCGGGGATAAACCG
ATGCCGGAACGCTGATGGCGTTTGACATGAGC
2879787
2879788
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AATTATTTCTGTGGCTGGGGTTTCGATTCGAT
2879848
2879849
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TGACGCTGGTCTATACCGGCAACGAACGCGAC
2879909
2879910
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTGACGGTGACGTCAGTGCCGAAGGCGAAATA
2879970
2879971
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCAGCTTACGCTATTTACGACGTTATTGAGCA
2880031
2880032
GTGTTCCCCGCGCCAGCAGGGATAAATCG
AAACGAAAGAGGCTATGCGGTTGTTTATCGGT
2880092
2880093
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCCCGATAGCGACGCTTCTGTAGTCACTGGCA
2880153
2880154
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GTGAGTTCGGTTTTAATTTCGTCGCTAAGCTGC
2880215
2880216
GTGTTCCCCGCGCCAGCGGGGATAAGCCG
CGTCACTTTCTGACATTTTATTCAGTTCGTTA
2880276
2880277
GTGTTCCCCGTGCCAGCGGGGATAAACCG
TCATTTCTGGACGGGGCTGTGTGACGAATACG
2880337
2880338
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TGTCCAATTAACCCAAACTTTGCGCGCTTAAT
2880398
2880399
ATGTTCCCCGCGCTAGCGGGGATAAACCG
GGATATGTGAAGTTCAGGTAGCCCATTACGCA
2880459
2880460
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTGATCGAGAGTGCGAAGAGGCAGAACGGGCA
2880520
2880521
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CAGGTTATGCGCAAAAATTAATTCATATTATA
2880581
2880582
GTGTTCCCCGCGCCAGCAGGGATAAACCG
GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
2880642
2880643
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTTCATCGGCAGCGTCACGCAATATGAAGAT
2880703
2880704
GTGTTCCCCGCGCCAACAAGGATAGCCGT
2880732
Left flanking sequence : Till position 2879239 (length
bp)
AGCAAATTAGCTGTTCTTTAATAATTTAAATTGTTGCGATTATGTTGGTAGAATGTGGTGCTGACAAAAA
GTAGTTTATAAACAATTATATCCGTTTAGT
Right flanking sequence : From position 2880732 (length
bp)
TGCATAATCATAATCTGTGTACCAGTAATGGCAGCTACAAACCTGTAAAGTAAAAAGGCCGCGTTTTCCC
GGGGAGGCTTTTAGACAGGAGAAGGCCATG
Print the CRISPR sequence : From position
bp To position
bp