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CRISPRs details
NZ_CP019870_16
Flanking alignement tool
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NZ_CP019870_16                                                                                                                 
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Strain :
Clostridioides difficile GCF_002007885
RefSeq :
NZ_CP019870 (chromosome circular)
CRISPR id :
NZ_CP019870_16
DR consensus (29 bp) :
CTTTACATACCACTTAGTTAATATAAAAC
Number of repetitions :
6
Begin Position :
2722783
End Position :
2723141
2722783
CTTTACATACCACTTAATTGATATAAAAC
AGTATAAAAATTAGTTACAGATGTATCTTTTTTGTT
2722847
2722848
CTTTACATACCACTTAGTTAATATAAAAC
TATTAATTTTCCTATGCTTGTACTCATACTCAAAAAG
2722913
2722914
CTTTACATACCACTTAGTTAATATAAAAC
GATTGTTATTTTACGAAAGGTACGGTCGTAATTTACGA
2722980
2722981
CTTTACATACCACTTAGTTAATATAAAAC
AAGCTAGCGGGGATAGACAATATAAATATCAACACTT
2723046
2723047
CTTTACATACCACTTAGTTAATATAAAAC
AAACGGAATATATATATACAGAGCTTAGAGGGGAACA
2723112
2723113
CTTTACATACCACTTAGTTAATATAAAAC
2723141
Left flanking sequence : Till position 2722783 (length
bp)
TATTCTTTAAATAAAAATTTATTTTTTAAATGATAATTAAATTTTTACTGATATGGCTATGCTTTTAAAA
GTCCTAACCTTATTTTGATATTATATCTGT
Right flanking sequence : From position 2723141 (length
bp)
CCCAAAATAAATTGAGCATTTCCAAGACTTACATCTATACAATTCTCTCAAATTTGCAGTGAACCACGAG
TAGTGCAAATGATAATATTTATCATATACC
Print the CRISPR sequence : From position
bp To position
bp