Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_LN554847_1                                                                                                                 top


Strain : Aliivibrio wodanis GCF_000953695 RefSeq :NZ_LN554847 (chromosome circular)
CRISPR id : NZ_LN554847_1
DR consensus (28 bp) : TTTCTAAGCTGCCTGTGCGGCAGTGAACNumber of repetitions :41
Begin Position : 1058738 End Position : 1061169

1058738TTAATATGCTGCCTGTACGGCAGTGAACACCATGGAATATTTGCGGCGTTTGCCTGGGGC1058797
1058798TTTCTAAGCTGCCTATACGGCAGTGAACTTGTGTTTATATTTACACCATCAATAACGAAA1058857
1058858TTTCTAAGCTGCCTGTACGGCAGTGAACAGCTATACCTTTAACAGCTAAGGTGTGGTGTG1058917
1058918TTTCTAAGCTGCCTGTACGGCAGTGAACATTTTTTGAATACCATTTACCCGGGCGGTGTT1058977
1058978TTTCTAAGCTGCCTGTACGGCAGTGAACCTCTGTTATTTACTATAACGGTTCGAATAACT1059037
1059038TTTCTAAGCTGCCTGTACGGCTGTGAACTAGAAGATATTGAAACCAATACACTTAAACTA1059097
1059098TTTCTAAGCTGCCTGTACGGCAGTGAACATCACTAAGAATGTGGGTCTTGCTGCTTCTGC1059157
1059158TTTCTAAGCTGCCTGTACGGCAGTGAACATGTGGTCTAGCTTAGCTAGTCTTACTATGGA1059217
1059218TTTCTAAGCTGCCTGTGCGGCAGTGAACTTCAATTACTTGAGTAGCCATACTGATACAGT1059277
1059278TTTCTAAGCTGCCTGTGCGGCAGTGAACCTTATCACTCTTCGTCAAATTTAAGGCATTCA1059337
1059338TTTCTAAGCTGCCTGTGCGGCAGTGAACAGCAAATGAGATTACGCGCTCTTTTGCTAATT1059397
1059398TTTCTAAGCTGCCTGTGCGGCAGTGAACCTCTTTTAACTCTTTAGTTTGCTGCTTGATTT1059457
1059458TTTCTAAGCTGCCTGTGCGGCAGTGAACCGATAAACTATAAAGAAAGTTTTAAATGTAAA1059517
1059518TTTCTAAGCTGCCTGTGCGGCAGTGAACACCTAGCCGCTCGAATGCTAATGACTCCCACA1059577
1059578TTTCTAAGCTGCCTGTGCGGCAGTGAACATGATCGCAGTTGCTAGAGGTAAGCGTAACGA1059637
1059638TTTCTAAGCTGCCTGTGCGGCAGTGAACCATCATAAGGCTGTCCTGGAGTTTGAGACGGT1059697
1059698TTTCTAAGCTGCCTGTGCGGCAGTGAACAGGAGGTCGATTTAACAGATGATTGATGAACT1059757
1059758TTTCTAAGCTGCCTGTGCGGCAGTGAACTTATATGATAGCTATGGTCTGGTGAGATAAGA1059817
1059818TTTCTAAGCTGCCTGTGCGGCAGTGAACCTCAACTTGCGTTTTCTCATCAACAAAACAAA1059877
1059878TTTCTAAGCTGCCTGTGCGGCAGTGAACATTTAGCGGTTGCCTGTTTTGCTTGAGCAAATT1059938
1059939TTTCTAAGCTGCCTGTGCGGCAGTGAACAAACTATCTACGATTGGAACGATTGCCGCTACG1059999
1060000TTTCTAAGCTGCCTGTGCGGCAGTGAACGAAACTTTAATTTTTTCTTGCTTGGATGAACT1060059
1060060TTTCTAAGCTGCCTGTGCGGCAGTGAACTATTTAACTTCAATACCGCCAAACGTCAGTTG1060119
1060120TTTCTAAGCTGCCTGTGCGGCAGTGAACATGCAACAGCTTCATAGCTTTTTCCGCCACCA1060179
1060180TTTCTAAGCTGCCTGTGCGGCAGTGAACAAATGAATAAAGAACTTTTAAGCGTAATTAAA1060239
1060240TTTCTAAGCTGCCTGTGCGGCAGTGAACTATTCAACGGTCAAGTTTCCCCCGCTTTTGATG1060300
1060301TTTCTAAGCTGCCTGTGCGGCAGTGAACAAGAAATCATAACATCATCACAAACTTGAGTAA1060361
1060362TTTCTAAGCTGCCTGTGCGGCAGTGAACTTGCAAATGAAAATTTCGTAGTGGTTTCGTCC1060421
1060422TTTCTAAGCTGCCTGTGCGGCAGTGAACAACCATCCGCAATCTCTCGACAGGTCTCTGGA1060481
1060482TTTCTAAGCTGCCTGTGCGGCAGTGAACAATAGATTGAATAATTCGTGAATCATCAAATG1060541
1060542TTTCTAAGCTGCCTGTGCGGCAGTGAACATATAGAGGGATCATTAACTGGAATAGAAAAC1060601
1060602TTTCTAAGCTGCCTGTGCGGCAGTGAACGGTTCTGTGGCTTTGGGTATTCCTCAAGCTAT1060661
1060662TTTCTAAGCTGCCTGTGCGGCAGTGAACTATTAATCATATTATGAACCCAATCTAGTAAA1060721
1060722TTTCTAAGCTGCCTGTGCGGCAGTGAACCTCAAAAGCTACTGCACACCAGTTACACTGTC1060781
1060782TTTCTAAGCTGCCTGTGCGGCAGTGAACTGTAACGCCCCCACACTATCCATAATTTAATA1060841
1060842TTTCTAAGCTGCCTGTGCGGCAGTGAACGATGAAAAAGGCGCAAAGAAGTACCGTTTTAA1060901
1060902TTTCTAAGCTGCCTGTGCGGCAGTGAACATTGCTCCTGATGGCTCTAAATGGGCTTGTGT1060961
1060962TTTCTAAGCTGCCTGTGCGGCAGTGAACTTGTTCCTATTGACGGTTATATTGCTCCTGAT1061021
1061022TTTCTAAGCTGCCTGTGCGGCAGTGAACGCACCTAGGGTTATTTTAGGATTATACTTATT1061081
1061082TTTCTAAGCTGCCTGTGCGGCAGTGAACTTGATAAGGGTTTTTTAACTAAACGTTCTGGG1061141
1061142TTTCTAAGCTGCCTGTGCGGCAGTGAAC1061169
Left flanking sequence : Till position 1058738 (length bp)
TATAATGAAAACGATTCGCATTCACCAGAATAAAAAAGTAAAGATTGTAAAGACGCATAAAATGTAAGGT
TTATTGTGATCAGAGAGGTGTTTTTAGGTT
Right flanking sequence : From position 1061169 (length bp)
AATAGAATATCAGCACAAAAATAAGTTACAACAAGTAGATAAGTAAAAATACCCATTTTTACCTAATTTT
TCCTACCTATTGTAACTTACTGATTTTATT
Print the CRISPR sequence : From position bp To position bp