Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_LN614756_10                                                                                                                 top


Strain : Clostridioides difficile GCF_000953275 RefSeq :NZ_LN614756 (chromosome circular)
CRISPR id : NZ_LN614756_10
DR consensus (29 bp) : CTTTACATACCACATAGTTGATATAAAACNumber of repetitions :3
Begin Position : 2258334 End Position : 2258494

2258334TTTTACATACCACATAGTTGATATAAAACTTAAGACTAGCAGACTCATAAGCAATTAGTTGCCTCT2258399
2258400CTTTACATACCACATAGTTGATATAAAACCTAGAGGCTCTCAGAGAAGTTATAAGATGTTTAGTAA2258465
2258466CTTTACATACCACATAGTTGATATAAAAC2258494
Left flanking sequence : Till position 2258334 (length bp)
ACAATCATTTCTTCTTTAGAATCAATTTGTAAAATATGAGGACTGTGTGTTGTGACAATTATTTGTGTTT
TTGGGAGAATTGTTTTTAATGTAATAAAAA
Right flanking sequence : From position 2258494 (length bp)
TCCAAAATAAACTTAGCATCTCCAATGTTTACACATATACAATGCTCTTAAAATTGCAGTGAACGCGCAA
TATTGCAATTGATAATACTTATCATATATT
Print the CRISPR sequence : From position bp To position bp