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CRISPRs details
NZ_LN908249_1
Flanking alignement tool
Page manual
  
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NZ_LN908249_1                                                                                                                 
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Strain :
Actinobacillus pleuropneumoniae serovar 8 GCF_001460855
RefSeq :
NZ_LN908249 (chromosome circular)
CRISPR id :
NZ_LN908249_1
DR consensus (28 bp) :
TTTCTAAGCTGCCTATACGGCAGTGAAG
Number of repetitions :
21
Begin Position :
238782
End Position :
240009
238782
ATTTGTGGCTGCCTATACGGCAGTGAAG
GCAGTCAGTCATCAGCTTGGACTTTTACTAGA
238841
238842
TTTCTAAGCTGCCTATACGGCAGTGAAG
TTTTCCCCCACCAACCGAGTGTTTTCAACATT
238901
238902
TTTCTAAGCTGCCTATACGGCAGTGAAG
GGAGCAGTTAGAAATTTATCGTCGGGGCGAAT
238961
238962
TTTATAAGCTGCCTATACGGCAGTGAAG
TTAAATAAAGATTACCGGCATAGTTTTGGTGT
239021
239022
TTTCTAAGCTGCCTATACGGCAGTGAAG
GTTTCTTCAGTGATTTTAGAAGCCTTTAAAAA
239081
239082
TTTCTAAGCTGCCTATACGGCAGTGAAG
GAAAGCGAAGCCATACTTTTATTAGTGGATAT
239141
239142
TTTCTAAGCTGCCTATACGGCAGTGAAG
GATTGTCAAGGTTTGGCGTAGCCAACCCGTAG
239201
239202
TTTCTAAGCTGCCTATACGGCAGTGAAG
TTATTTCTTTAAGAATCATTTTATCAGCATAA
239261
239262
TTTCTAAGTTGCCTATACGGCAGTGAAG
ACGGTAATGGGAAAGGACAGGGTTCAGGCGTA
239321
239322
TTTCTAAGCTGCCTATACGGCAGTGAAG
GAAACCGGTGAAGTTAAAGATAAGCACAATTT
239381
239382
TTTCTAAGCTGCCTATACGGCAGTGAAG
AAATCTACACGCAAGAGCGGTTAAATGTGGCA
239441
239442
TTTCTAAGCTGCCTATACGGCAGTGAAG
AAAGTATTGTTAAGCGTGTGCGTAAAATTGTA
239501
239502
TTTCTAAGCTGCCTATACGGCAGTGAAG
GCTTGAGATTTCATTTTCTCCTTTTTCTCAAA
239561
239562
TTTCTAAGCTGCCTATACGGCAGTGAAG
TTGCTGAAAAAGTCATTTTACTTGAGAAGTCT
239621
239622
TTTCTAAGCTGCCTATACGGCAGTGAAG
ATGAAAAAGACGATTGCTGAGCAGCTAAAACA
239681
239682
TTTCTAAGCTGCCTATACGGCAGTGAAG
TTGCGCCTGCTGGTTTCCAGTCGCTGTCAATC
239741
239742
TTTCTAAGCTGCCTATACGGCAGTGAAG
AAGTCGTTCGTAGGTGCTTCTGTGCTTAATTC
239801
239802
TTTCTAAGCTGCCTATACGGCAGTGAAG
TTGTTCCTTATAGTAAAAATCCCGCACTTGGC
239861
239862
TTTCTAAGCTGCCTATACGGCAGTGAAG
ACGAATTAGCTTAATCTCCAGTAAATCCACTG
239921
239922
TTTCTAAGCTGCCTATACGGCAGTGAAG
ATGTGCGGAGTTGTGTCATTCACGGATAAGCA
239981
239982
TTTCTAAGCTGCCTATACGGCAGTGAAG
240009
Left flanking sequence : Till position 238782 (length
bp)
TCGCCCGCTTAGAATGTAAAATCGTCTTTAAATCCGAAGACGGAATATAAGGTGTTTTTTTCATATTATT
TTCTCCGATGTTATTTATGGAATACAGTTG
Right flanking sequence : From position 240009 (length
bp)
TCGTTATTTTACTTTAGAATGTCAGATATACCAAGTTGTTAAAGAGCTTTTAATCAAAAAATCCCTTTTT
TGAGCGGTTTTTATAACCCTTTGTTTCTAA
Print the CRISPR sequence : From position
bp To position
bp