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CRISPRs details
NZ_LT549890_7
Flanking alignement tool
Page manual
  
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NZ_LT549890_7                                                                                                                 
top
Strain :
Sulfolobus solfataricus P1 GCF_900079115
RefSeq :
NZ_LT549890 (chromosome linear)
CRISPR id :
NZ_LT549890_7
DR consensus (24 bp) :
GATAATCTCTTATAGAATTGAAAG
Number of repetitions :
142
Begin Position :
1394919
End Position :
1403850
1394919
GATAATCTCTTATAGAATTGAAAG
ACATTGTACCAGTGAAGGAATATTTCGATGCTATTATGA
1394981
1394982
GATAATCTCTTATAGAATTGAAAG
TCTTTCTATCGAAGTACTTTGCCAATGCTTCCTTGAGG
1395043
1395044
GATAATCTCTTATAGAATTGAAAG
AGTTTATTTCTAGTAACTCACGCCACGTTCTTTCAATTGT
1395107
1395108
GATAATCTCTTATAGAATTGAAAG
GATGTTGAAGCGGAAGATAGTATAATCACCACCTTGAC
1395169
1395170
GATAATCTCTTATAGAATTGAAAG
TCGGGTCATCTGCATCCAATGTCACGTATAACAGCTGTG
1395232
1395233
GATAATCTCTTATAGAATTGAAAG
TACAACGAGTTTCATCTTCTTTATTTCATGCCACCGTTTTG
1395297
1395298
GATAATCTCTTATAGAATTGAAAG
AAATGGGATGATGAGGGTGTTCAACAGATACAACACC
1395358
1395359
GATAATCTCTTATAGAATTGAAAG
CAGGATTACCTCTAGAATATAACGTACGTAGGGTGCATTT
1395422
1395423
GATAATCTCTTATAGAATTGAAAG
TACAAATAACTAAGAACGCTGACGATTTCGTGAAGACCGC
1395486
1395487
GATAATCTCTTATAGAATTGAAAG
CTTCATATGTTAAACCATAACAGATTGCACGTGCCACTA
1395549
1395550
GATAATCTCTTATAGAATTGAAAG
AGGACAGCATCAAGGAGTTCTGGTTGTAATTGTTTCTCGTAT
1395615
1395616
GATAATCTCTTATAGAATTGAAAG
ATCTCTCATTTCTTGGCTTACCCTCACACGAATTTGGGCTT
1395680
1395681
GATAATCTCTTATAGAATTGAAAG
ACAGTAATGAGGTGTAACCCCTGAGACCTCAGGAGAA
1395741
1395742
GATAATCTCTTATAGAATTGAAAG
TGGGAATACGTCTATGACTTACTAATGCCAGCGAAAGAGA
1395805
1395806
GATAATCTCTTATAGAATTGAAAG
CCGTGCTTCACGCCCTGTTTCTCCAAAACAAGAAAGGA
1395867
1395868
GATAATCTCTTATAGAATTGAAAG
ATGTACCCATATGGGTGAACTTGAAGAAAAAATGGTTAA
1395930
1395931
GATAATCTCTTATAGAATTGAAAG
ATGCTGTACAGTTCTGCAGTTATCTTTTGGCTTAGAAATAGT
1395996
1395997
GATAATCTCTTATAGAATTGAAAG
TTCAGAAGAGGAAGAGGAAGCAGACAGAGCGGTGGGGCT
1396059
1396060
GATAATCTCTTATAGAATTGAAAG
TTCAGTTTGCTAACGCCTGGGCTATTGATCCTTTTGCC
1396121
1396122
GATAATCTCTTATAGAATTGAAAG
TTATTTTCGCAATGATAGCTGGATCGATACCGTTCTTTGCC
1396186
1396187
GATAATCTCTTATAGAATTGAAAG
GCCACATAGTATTGACTACGTGACGGGAATAATAACTGATA
1396251
1396252
GATAATCTCTTATAGAATTGAAAG
CTTCTATGGCCATGATTCTTGCCATTGGACGAAGTCCTC
1396314
1396315
GATAATCTCTTATAGAATTGAAAG
ATCATCGAGTACGGAAGATTCCTAGGGTGGAGATCATTA
1396377
1396378
GATAATCTCTTATAGAATTGAAAG
TTCGTTGCGTTTACCATGTTCATGTAAATTAATACTTGG
1396440
1396441
GATAATCTCTTATAGAATTGAAAG
TCTTCGTCATAGCCTGGTCTTCCTGCACGTCCGCAAA
1396501
1396502
GATAATCTCTTATAGAATTGAAAG
ATTATCTTCACATTAAACCCCACTCCTAGAGTTGAATTTGA
1396566
1396567
GATAATCTCTTATAGAATTGAAAG
GTATCAGCAGTGAACCATTCATACTGGATGTTGCGAATC
1396629
1396630
GATAATCTCTTATAGAATTGAAAG
GATAATAATCAACGAGGCAAACTCCATGTTCTACAAAC
1396691
1396692
GATAATCTCTTATAGAATTGAAAG
TTTCAAAGGGAAAATCTGAATAAATACGTCTGGAAATTG
1396754
1396755
GATAATCTCTTATAGAATTGAAAG
AGTTGCTTTTTATAGTTTCTCTGACTGTGCACTGTCATG
1396817
1396818
GATAATCTCTTATAGAATTGAAAG
AGCTCTTCTCATGAAAGTTTATAAATTTTGTAGTTACATACT
1396883
1396884
GATAATCTCTTATAGAATTGAAAG
ACAAAATAATTTCTAGTCCAAGCTTTCACGGCTGCTTCT
1396946
1396947
GATAATCTCTTATAGAATTGAAAG
TACTGCAATGCGCGTTTCAATGCTAACAATGCTCCGAT
1397008
1397009
GATAATCTCTTATAGAATTGAAAG
CTTCAAGAATGAGCAAACCGCAAGCACTTAAAAAGATT
1397070
1397071
GATAATCTCTTATAGAATTGAAAG
TAACTACTGCAGTAGTATTTTTTGCGTTAGCTACAATGT
1397133
1397134
GATAATCTCTTATAGAATTGAAAG
TAATTTCTGCATAAATATCTTCCACAACACGTTTGCTTACG
1397198
1397199
GATAATCTCTTATAGAATTGAAAG
TCTTCAAGGCTTAATTCGCCTTGTTGTGTCCCACCCTCTA
1397262
1397263
GATAATCTCTTATAGAATTGAAAG
AAAGTACTTAGTCGTATAACAGTCTTCTTGGGCGAGG
1397323
1397324
GATAATCTCTTATAGAATTGAAAG
ACTCAAAAAGAGTTTGAAAATTTTGTTGAATTTGTAAA
1397385
1397386
GATAATCTCTTATAGAATTGAAAG
GTAACTGGGTCGTGGACTGTGTACAACGACGGCGATAAT
1397448
1397449
GATAATCTCTTATAGAATTGAAAG
GAAACTCGTGCCAATTTGTTGAGTCAAAACTTAAATAGAAT
1397513
1397514
GATAATCTCTTATAGAATTGAAAG
CATGGTGGGGGGGCGTCAAAAATTCAGAAATATTTTGCAT
1397577
1397578
GATAATCTCTTATAGAATTGAAAG
AACTCCTTTGCAATCCTATATCTAGTGTAGCCGTCTAA
1397639
1397640
GATAATCTCTTATAGAATTGAAAG
CTGCTCCATCAAACGGCCCCGTGAGGGATACTATGAA
1397700
1397701
GATAATCTCTTATAGAATTGAAAG
AATTTGAACATAATTCGGCCTCGTCAGTTTTCCACAGATA
1397764
1397765
GATAATCTCTTATAGAATTGAAAG
TCCCTAACTTAGGTTGGGGTAAAGAAATAGAACATAGAT
1397827
1397828
GATAATCTCTTATAGAATTGAAAG
TTTACTGACAACGCCATCATACTTACTAGCCCAACTAA
1397889
1397890
GATAATCTCTTATAGAATTGAAAG
GTCCATTCTCCATTTATCTCAACCTTATCACAAATTTGGA
1397953
1397954
GATAATCTCTTATAGAATTGAAAG
TCAGTTCTAGAAAGAATTATTAGCATTAGATCTTCTAGACT
1398018
1398019
GATAATCTCTTATAGAATTGAAAG
CTCTCTATCCCAGATGGAATTCCAAAGGATCAAGCAG
1398079
1398080
GATAATCTCTTATAGAATTGAAAG
ATCTGAATTTCCTCAGCTTCCATTGCATAATTTATTCTA
1398142
1398143
GATAATCTCTTATAGAATTGAAAG
TATTTACCTTAATATTATGTATAATAGATAAGAGCTCCCT
1398206
1398207
GATAATCTCTTATAGAATTGAAAG
ACTATGGACCTACTACAGGGCCTATCTGACTTTCTGTC
1398268
1398269
GATAATCTCTTATAGAATTGAAAG
TTATTGTCAGAAAAAGAAATTATACTCCGATTAATAGC
1398330
1398331
GATAATCTCTTATAGAATTGAAAG
GTCAAAATTGCCCAACCGAACGTTAGCAAAAATGCAGCAC
1398394
1398395
GATAATCTCTTATAGAATTGAAAG
TCCCTTTCAGATTTGCAATATGTTAGAGCGAGCTTCGCAAA
1398459
1398460
GATAATCTCTTATAGAATTGAAAG
GCTGAATTGTAAAATTACGTTTATTACTTTCAGTCAACC
1398522
1398523
GATAATCTCTTATAGAATTGAAAG
GTTTTATTTATAAACGGCGGGTCTAGATAAAATACAGTT
1398585
1398586
GATAATCTCTTATAGAATTGAAAG
TCACTCTTTCAGTCATCATTCTCTTTGCTGAGATTGCTCT
1398649
1398650
GATAATCTCTTATAGAATTGAAAG
GCGAAAACAATAGCAGGCGAAATAGAAGATAAAAT
1398708
1398709
GATAATCTCTTATAGAATTGAAAG
GCAATAGACAATATAAGGAAGAGCTTACCACCTAGAGGC
1398771
1398772
GATAATCTCTTATAGAATTGAAAG
CCTAGAGGCGTAGCGGGCTCACAAGAAAACATTAAT
1398831
1398832
GATAATCTCTTATAGAATTGAAAG
AATGCCTGAAGCAATAACGCCCAAGTTACATGCTCTTG
1398893
1398894
GATAATCTCTTATAGAATTGAAAG
ATCCCGCTACGGCAATCCCTACGAATAGATCGGCATTA
1398955
1398956
GATAATCTCTTATAGAATTGAAAG
GTGTATAAGCACATTAGTAGGATTAGGCACGGTACAAG
1399017
1399018
GATAATCTCTTATAGAATTGAAAG
AATCACGAAAGCGATACTAAGGGCAATACAATACAAACATG
1399082
1399083
GATAATCTCTTATAGAATTGAAAG
CTTATTTTGGTGTCAATAATCTGTATGTTGCCGTATTGC
1399145
1399146
GATAATCTCTTATAGAATTGAAAG
AGATTGTTTTATTAATACCAAGTAGACAATTATATATTTT
1399209
1399210
GATAATCTCTTATAGAATTGAAAG
CCAAAACATGTCACATGTGCCGATATTGATATTTACAAA
1399272
1399273
GATAATCTCTTATAGAATTGAAAG
AAATCTACCGATCAACGGACGAGGGGGAACGCTAAGAA
1399334
1399335
GATAATCTCTTATAGAATTGAAAG
GGGAGTTCCCATTCGATTTTGGGAACCCTCAAGCACAGTCTGTG
1399402
1399403
GATAATCTCTTATAGAATTGAAAG
TTGTGCGCCTAGAGTTGCTACGCCTTGTTTCCACACCTCAT
1399467
1399468
GATAATCTCTTATAGAATTGAAAG
CTAACTTGTTAAAGTTCTGTTGTAGCTCGTTAAGTTGT
1399529
1399530
GATAATCTCTTATAGAATTGAAAG
GTTCCAGCTAAGATGTTCTTTCCTGCAGTCTTTGTT
1399589
1399590
GATAATCTCTTATAGAATTGAAAG
AACTAAGCCTTCACTAGGTGAGATAAAGAGCATAGCTAT
1399652
1399653
GATAATCTCTTATAGAATTGAAAG
ATCCGTTCTCCGTCCCGATCCGTACCGTTCTCTGTACT
1399714
1399715
GATAATCTCTTATAGAATTGAAAG
AGCATAACTTCATCTTCTTCTACAACTTCGACAGCTT
1399775
1399776
GATAATCTCTTATAGAATTGAAAG
TTAATTTATTGTCATCAAATCTATTTAGATACGCTAGTATTA
1399841
1399842
GATAATCTCTTATAGAATTGAAAG
ATATTTCTTCGAATGGGTTTTCTGTATCACCTTCTTCAT
1399904
1399905
GATAATCTCTTATAGAATTGAAAG
CATTTGTTATCAACTGTCCGGGTCCAGCGCTAGATGCGGT
1399968
1399969
GATAATCTCTTATAGAATTGAAAG
CAAAGTCAGAGCTGGACTATCGTAGACATCTATAATA
1400029
1400030
GATAATCTCTTATAGAATTGAAAG
ACGTAGCCTAGACTTGCTATAACTCCGTTGTATTGCCC
1400091
1400092
GATAATCTCTTATAGAATTGAAAG
ATACCAACAGCAACAACAAACTTATTCTTCGCTCATACA
1400154
1400155
GATAATCTCTTATAGAATTGAAAG
ACGAACACACCCCTTAAAACTCTTTTTCCAACATTCACCT
1400218
1400219
GATAATCTCTTATAGAATTGAAAG
CAAAGTCAGAGCTGGACTATCGTAGACATCTATAATAGAG
1400282
1400283
GATAATCTCTTATAGAATTGAAAG
TCTTAGCGAACTTGCAAAATATTCCGACCAAAGCTAATA
1400345
1400346
GATAATCTCTTATAGAATTGAAAG
TCAGGTGAGGAAGATGGTCTCCAAAACTACTGTTATTGGT
1400409
1400410
GATAATCTCTTATAGAATTGAAAG
GAGAGCTACAAACACGCTACCTAATAAAATTTCCAGATTGTAG
1400476
1400477
GATAATCTCTTATAGAATTGAAAG
ATACAGATTTCGTTATCCATATCCTACATGACTTTCC
1400537
1400538
GATAATCTCTTATAGAATTGAAAG
ATACATCGATCTTGTAATTAGATATCCATTGACTGTTAT
1400600
1400601
GATAATCTCTTATAGAATTGAAAG
ATGGAATAGGCTCTCAACAGCAGTATAATTGGCAAGTATT
1400664
1400665
GATAATCTCTTATAGAATTGAAAG
TCTACTCTTATAATTCCGTTACTTATCTTAACAGAGAACG
1400728
1400729
GATAATCTCTTATAGAATTGAAAG
CGTTTCTATTGCAAGGTCTGAGATTTTTGGCCTGAGTA
1400790
1400791
GATAATCTCTTATAGAATTGAAAG
GTATTGAAACGCTTAAGGTCAGCTCTAATTCTGTACGGAT
1400854
1400855
GATAATCTCTTATAGAATTGAAAG
ATGTTACTAAGTAAGTTTAATAATATATTATAAAATGCCATATA
1400922
1400923
GATAATCTCTTATAGAATTGAAAG
CTAAGCAGTGACTCACAGTTTAGACATTCACAAGTATC
1400984
1400985
GATAATCTCTTATAGAATTGAAAG
TTCTAAGCGTGTAAAGATCTATCTGACAACACGAAACTATG
1401049
1401050
GATAATCTCTTATAGAATTGAAAG
TTGAATATTGTACAAAGGAACGTTTAACCCTATAATAGAC
1401113
1401114
GATAATCTCTTATAGAATTGAAAG
CAATCCCATTCGTTTTACTCACTTCTAAGAACCTCGC
1401174
1401175
GATAATCTCTTATAGAATTGAAAG
AGTCTCTGCATCATGATCCCTGCCCCAGCTAAGACGTTCT
1401238
1401239
GATAATCTCTTATAGAATTGAAAG
ACGATTTTCGGTGTGAATAATGTAAATTTGCAAGTATCTG
1401302
1401303
GATAATCTCTTATAGAATTGAAAG
GTCTTTATGGCCCTCTGGGTCTTTCCACCATTGAGAGGA
1401365
1401366
GATAATCTCTTATAGAATTGAAAG
TTATCCTCATTCTATCGGTGAGTGGAACAAATTGGGTAGC
1401429
1401430
GATAATCTCTTATAGAATTGAAAG
ATCGTTATGCTGTAAACTTCCCCGGTTCTCAATCCCGTTT
1401493
1401494
GATAATCTCTTATAGAATTGAAAG
AGTTAACAATACTTTATTGTCAAAGAAGCAAGGATATGCG
1401557
1401558
GATAATCTCTTATAGAATTGAAAG
TTCAAACTAGATCTAGAAGATTTCTATCGGCATCTTTACAT
1401622
1401623
GATAATCTCTTATAGAATTGAAAG
ACGATATGAAAGTTGCCAGAGCCTTAAACAGAATTGGTTC
1401686
1401687
GATAATCTCTTATAGAATTGAAAG
GCTTCTTGTCCCTGAACTCCTTCTTGAAATGGATTTATT
1401749
1401750
GATAATCTCTTATAGAATTGAAAG
TTTCGTATAAGGACCAGAACGGCAATACCCAAACTGT
1401810
1401811
GATAATCTCTTATAGAATTGAAAG
CTACTACATCATCCTCTACCACGCCAAGCCAACAACC
1401871
1401872
GATAATCTCTTATAGAATTGAAAG
ATCTAGCGTTGTCTCTGCCGTTATATATTTGAAAGTGT
1401933
1401934
GATAATCTCTTATAGAATTGAAAG
ATCGCTGATCCAGAACCACGTGGCGAATACAGGAAGAACTA
1401998
1401999
GATAATCTCTTATAGAATTGAAAG
ATCAAAAGTCCGCTATGGTCTAACGGTGTAAATAATTCT
1402061
1402062
GATAATCTCTTATAGAATTGAAAG
AATTGGATCCCTACGGTTGACGGATCACCGAAAGTGT
1402122
1402123
GATAATCTCTTATAGAATTGAAAG
ATCATATTTTGAATTCTCTTATACAGAAATCTTTGATAT
1402185
1402186
GATAATCTCTTATAGAATTGAAAG
ATAGCTATATATGGAAATGTTCCAGACGCGGAATATGTTGC
1402250
1402251
GATAATCTCTTATAGAATTGAAAG
AAGCCTACACAGGATAGGATACTCAAATTATATGAAAAT
1402313
1402314
GATAATCTCTTATAGAATTGAAAG
TTTGCGCATTTACTTTTGTATGAGCTAGGCTATTTACATCAT
1402379
1402380
GATAATCTCTTATAGAATTGAAAG
CTGAAATATCCTTCAAATTGATTTGCCAATAAATTAA
1402440
1402441
GATAATCTCTTATAGAATTGAAAG
TGTTCTGTCGTTACTGTCGTAAAGCACGTCCTATTAT
1402501
1402502
GATAATCTCTTATAGAATTGAAAG
ACAGTGCAGAAGTCTAATCCAAATTATTCTACTTTAGC
1402563
1402564
GATAATCTCTTATAGAATTGAAAG
TCCTTGGAGATGTTGATGTTTTATACGGTATTATGTGAA
1402626
1402627
GATAATCTCTTATAGAATTGAAAG
GCACAATTCGCCAACGATTTCGGTTCGCTTTATACCTT
1402688
1402689
GATAATCTCTTATAGAATTGAAAG
CAAATTTCGGCGAAAATTGTACCGAATTTCGGCATTGCTGG
1402753
1402754
GATAATCTCTTATAGAATTGAAAG
AAGATCATGGTATTGATATTCAAAAACATTATTCAGAGTG
1402817
1402818
GATAATCTCTTATAGAATTGAAAG
ATTAGAAAAGTTTAAGATTACGCATGCAAATATGTTTTTGAT
1402883
1402884
GATAATCTCTTATAGAATTGAAAG
TTCTGTTTCGAAGAAAACCCGCCTCAGATTCATTATGGG
1402946
1402947
GATAATCTCTTATAGAATTGAAAG
AAATCAAACGGAAACTCCCCGGATATTATCATGTCTAAA
1403009
1403010
GATAATCTCTTATAGAATTGAAAG
CCTCATCGTAAACATGCAATCTTGCATATTCAGTGTA
1403070
1403071
GATAATCTCTTATAGAATTGAAAG
GCGATATATGTTATAAGAGGAGAAGGGACTTTACCCCCT
1403133
1403134
GATAATCTCTTATAGAATTGAAAG
ATATACATCGCCGGTTTTATAGCAACTGCACAGCAACAAAT
1403198
1403199
GATAATCTCTTATAGAATTGAAAG
GAAGTTGCAAAAATTGCCAATGTTTTTTTCAAACGCGT
1403260
1403261
GATAATCTCTTATAGAATTGAAAG
ATTTATGATGAAAATAGGAAATTTTTCAGAAGAATTATA
1403323
1403324
GATAATCTCTTATAGAATTGAAAG
AAAAGTTTAAATACCCGAAGCCACAAAGGTAAAAATA
1403384
1403385
GATAATCTCTTATAGAATTGAAAG
CGTTCTAGAGCTAAACGATGCATACGCGGTGGTACAACTA
1403448
1403449
GATAATCTCTTATAGAATTGAAAG
ATTCGGGGAAAACTTATGCATTATAAGAAGAAGAGATATTT
1403513
1403514
GATAATCTCTTATAGAATTGAAAG
TCAAATAAGGAACAACTCTGGGTAAGCCCACAATACGCAA
1403577
1403578
GATAATCTCTTATAGAATTGAAAG
CTTAGCGTCTCAACCTGAACCAAACTTCCTAGATCAAC
1403639
1403640
GATAATCTCTTATAGAATTGAAAG
TAAACTAGATCCTTATATTTCACGTAAATGTAAAGGGG
1403701
1403702
GATAATCTCTTATAGAATTGAAAG
TAAGGAGTAAGCTAGCACTAGCAATAGCGGTTGCAATA
1403763
1403764
GATAATCTCTTATAGAATTGAAAG
GTTCATCAGTTCTACCTTTTGGTCCAAAGGCTGATCCAA
1403826
1403827
GAGAATCTCTTATAGAATTGAAAG
1403850
Left flanking sequence : Till position 1394919 (length
bp)
GATTTTTTCTGATTAACCGGGGAGTTAATTCTTTTTTTAACGAATAACGTATGTTCTACCCTTATAATGC
CTTAGGAGCGCTGCATACAGATTCCTGTCG
Right flanking sequence : From position 1403850 (length
bp)
ATCTTGATGATATTCAATGAAGTCCATTAGTACTTCCCCCCAAGGAGGTTGGAGAGAGGGAGAAAAAGAG
TCGTTTGAGAGGTTGATAAATAGGATTATG
Print the CRISPR sequence : From position
bp To position
bp