Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_LT596221_2                                                                                                                 top


Strain : Yersinia pseudotuberculosis GCF_900092345 RefSeq :NZ_LT596221 (chromosome linear)
CRISPR id : NZ_LT596221_2
DR consensus (28 bp) : GTTCACTGCCGCACAGGCAGCTTAGAAANumber of repetitions :11
Begin Position : 1749085 End Position : 1749713

1749085GTTCACTGCCGCACAGGCAGCTTAGAAATAATCTGGCTGGTGAGAACATGATTGCGATTC1749144
1749145GTTCACTGCCGCACAGGCAGCTTAGAAACTAACCCACTTTTAAACGCGGAAGGTAATGCA1749204
1749205GTTCACTGCCGCACAGGCAGCTTAGAAAAACAACGCGCGGAAGACAAGAAGGCGGCTCTT1749264
1749265GTTCACTGCCGCACAGGCAGCTTAGAAAAATTCCGCAGCTAATTGAACGTTACTCATTTCT1749325
1749326GTTCACTGCCGCACAGGCAGCTTAGAAAGGGAACATTTGGCGGAAGAATTGCGAGGTGGT1749385
1749386GTTCACTGCCGCACAGGCAGCTTAGAAACAAGAAAAGACACGCCAAATATCTGAGCAGTA1749445
1749446GTTCACTGCCGCACAGGCAGCTTAGAAAACACGGGGCGGGAAAATTGGATATATTGATTC1749505
1749506GTTCACTGCCGCACAGGCAGCTTAGAAAGCTAATGCTAATAAAGAAGTTGAGCAAATGCG1749565
1749566GTTCACTGCCGCACAGGCAGCTTAGAAACAGCAAGGAACATCGTCAGAAAAAACACTCTA1749625
1749626GTTCACTGCCGCACAGGCAGCTTAGAAAGTTACGTGGCAAGTATCCGACCCGACGCTGGG1749685
1749686GTTCACTGCCGCACAGGCAATAATCAAA1749713
Left flanking sequence : Till position 1749085 (length bp)
TTGATTTTACATTGTGGTTATCGGTGGTCTAAAAAAAGGGTTTTTTCCCCATTAGCGAAATAAGTATTTT
ACAAACAGGATGTTATCGTATTATCTTACT
Right flanking sequence : From position 1749713 (length bp)
TTCTGGACCATGCGTTGATGCTATTTGGGGAGCAAAATTGCGAGCGGAAGCGCATTTTGTAACTGACAAC
AGGGAGAATGGCATCTTTTATTACTGACTT
Print the CRISPR sequence : From position bp To position bp