CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_005230_1
Flanking alignement tool
Page manual
  
Home Page
NC_005230_1                                                                                                                 
top
Strain :
Synechocystis sp. PCC 6803
RefSeq :
NC_005230 (plasmid pSYSA )
CRISPR id :
NC_005230_1
DR consensus (37 bp) :
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
Number of repetitions :
50
Begin Position :
16310
End Position :
19901
16310
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
GATTGTTGTGCCCCTGGCGGTCGCTTTCAATGCCT
16381
16382
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TAATCCTAATTAGGTTTGAGTTAGTATCTAGTGCCAT
16455
16456
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
ACAGATTTTGCTTCAGCTAGTACCAAAGGCTAG
16525
16526
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TCGTAACTACCTTCTAAGTCTGTAGCGATGAATGTGG
16599
16600
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
CAAAATATAGGGAAGAATTTTAGAAAGAACCTCAGAA
16673
16674
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
AACTAAGGCATCCCATAGCATTCCGCTACGATCTATCAG
16749
16750
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TAATAATTGCTGATTAATCGTGGTGGTGGTGGTGG
16821
16822
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
GATATATGGCTAAATATTGCTCAAAAGATTTTAATA
16894
16895
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
ATTAGATTGGTCGTGTTTTGATTAACGGTGCTAGC
16966
16967
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TTGCCATCCCAGGCAACATAGCAAGCATGGAGGTG
17038
17039
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TTGCCATCCCAGGCAACATAGCAAGCATGGAGGTG
17110
17111
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TTGCGGACAGACTCGATTAAGTCAATAACAGCTTGG
17183
17184
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
CTTGCCCTAATTTTCCTGGTGGAAAAGCCGCTGGCT
17256
17257
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
ATAGCAAGTTGCTAGAGAAAGCGCAACAAAACAAG
17328
17329
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
GAGGTTAAATTGTTGTCGATTCAAGAAGACTTGA
17399
17400
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
AATAGACACGAATTCCGGTTCCAGACCCAGCCCGTT
17472
17473
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TTCTTCCATCAGTCCAAGTTCTTCAACAATGTCTA
17544
17545
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TGCTGAAGAAGCTGGAGAGAATCGGGCATCGCTAT
17616
17617
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
ATTCCAGATGTGGTGGAAGAAACCTACGCCCCCGA
17688
17689
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
AATCAGCTTCCGGCGTTGCCATTTGGATTCAA
17757
17758
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
GTGAGGGGGCCAGATCCCTGCCAGATCCCCCAAT
17828
17829
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
ATTAGATCTTTGGCATAAGGCAACCGAAACTGATC
17900
17901
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
GATTATCGTGCTTCCTTCGATGCTAACTTTGCTCT
17972
17973
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TCCATAATGATTCTGCCTCGTTTCTACTTGGTTTA
18044
18045
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TGTATGTCACGCCATCGGACAGGTAGGGAAAGCCTGG
18118
18119
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
CAACTGGCTAAGCTGGTCATAAGGCTTTGGGAATGAAA
18193
18194
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TCGGGTTTCCCTCCTGGGTAATGACGCCTACGGG
18264
18265
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
CAAAGCTGGCACGGAAGCCCTTAAGGATATCCTC
18335
18336
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
GATGCAGAGATTCCACCACCAAAGGAGAATCCGATAA
18409
18410
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
AAAGATTGGGACTTTTAACTGCAAAATACCAGGCTAG
18483
18484
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
ATTTGTTGGGCCATCCTGCCCTGTCCATTGAGGTTAAGCGG
18561
18562
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
AAAGATTGGGACTTTTAACTGCAAAATACCAGGCTAG
18635
18636
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
ATTTGTTGGGCCATCCTGCCCTGTCCATTGAGGTTAAGCGG
18713
18714
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
AAGTAAGGTTCAAACGCCGCTACGCAGTCTGGTCC
18785
18786
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
CAAAGTTGGAACGAAAGCTAACGACAAAAACTA
18855
18856
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TTTAGCCATCGTCGGATTCTAATCGATCCAAAAGTCGG
18930
18931
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
AATCCTACCAAGCGGCTTTTGGTGGGCCTGGCTCCGA
19004
19005
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TTCGGTTGATTGATGAAGATCTGATCGTCGAGTGGT
19077
19078
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TCCCTTTTCGGGGATAGGTGGTGTCCCTTTTCGG
19148
19149
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
ACTACCAGGGGGAAATTGATGGTATTCCCGGCAAA
19220
19221
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
ACTACCAGGGGGAAATTGATGGTATTCCCGGCAAA
19292
19293
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
GGGCAATGTTAAGCATGGCTAGAAGGAATAGTTAAC
19365
19366
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TTCCATTAATGATTCTTCAAAAATCACTCGATT
19435
19436
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
ACTGTTACTAGCCACCGCCCAACTCCTTTAATACTT
19508
19509
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TCTTCTGTTACGTAGATTTTTCCTGTTTCGCCAACAG
19582
19583
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
CATCGCTCCCAGCATATTGTCCTGAACGGTCGGCAAT
19656
19657
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
GATTTTTCCAGTGATGGTGCATACCTAGCCGTAG
19727
19728
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TAGTCCCTCCCACACTGCCAATATTTCTTCAT
19796
19797
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
TCCGTCTGTATGACTTATACTCGCAAGGATT
19864
19865
CTTTCCTTCTACTAATCCCGGCGATCGGGACTGAAAC
19901
Left flanking sequence : Till position 16310 (length
bp)
TACTATTTTGAAGGTCTGGCTGATTTTGGAAAGATATTCTGGAAGGTTTGCCAAAGTCTGCTTTCCTCCA
CTTTCCCCGTAAGGGGTCGGAGGGGGCGGT
Right flanking sequence : From position 19901 (length
bp)
ACGCCGCCAGCCCACCAGCGCCAGTTAACATCATCTCCAAGTCTAAACTGAACCCCACCAGTAGCGCTAA
AAACAGCTATTTGAGAATCAGCCATGATTG
Print the CRISPR sequence : From position
bp To position
bp