CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_008698_6
Flanking alignement tool
Page manual
  
Home Page
NC_008698_6                                                                                                                 
top
Strain :
Thermofilum pendens Hrk 5
RefSeq :
NC_008698 (chromosome circular)
CRISPR id :
NC_008698_6
DR consensus (24 bp) :
CTCTTAGTCTTGCTGATTTTGAAC
Number of repetitions :
8
Begin Position :
1260196
End Position :
1260642
1260196
GTCTTAGTCTTGCCGATTTTGAAC
GGGCGAATCCCAGTCTATCGACGGGTCAGGGATACT
1260255
1260256
CTCTTAGTCTTGCTGATTTTGAAC
TAGCGCTCGCAAGGCATGCGCAAACGAAGGTCGTCATGG
1260318
1260319
CTCTTAGTCTTGCTGATTTTGAAC
ACGCCGCCGGTCTACGAGGTCAGGCTAGCCGCACTGCTACA
1260383
1260384
CTCTTAGTCTTGCTGATTTTGAAC
TGTATGATAAAAGAATTCACGTCCCGATCCACGTCAA
1260444
1260445
CTCTTAGTCTTGCTGATTTTGAAC
ATACGGGGTCGTCCCTCTGCGCGGCGAGCTTGT
1260501
1260502
CTCTTAGTCTTGCTGATTTTGAAC
TTGTCCCGTACGGATTCGGCGCGCTCATGCTCGCGC
1260561
1260562
CTCTTAGTCTTGCTGATTTTGAAC
TCCTAAGGCTTGCCCCATTTTGCGCGGACATCC
1260618
1260619
CTCTTAGTCTTGCTGATTTTGAAC
1260642
Left flanking sequence : Till position 1260196 (length
bp)
GGGTCGACGTAGTGGTAACGTCAGCCCCGTTTAGAGCCCTACCCCTAGACTTCACGACGGCGATGGGCCG
CTAACGCAACAACCGGCGAGAAAGCCCCAC
Right flanking sequence : From position 1260642 (length
bp)
TGAGGGGTTTGTGGGAGCCTTTTCCCGCAAATCCGGGTTTTATTTCTCTGTGGTGGTATAAAACGTTTTC
TGTTCCCTTCTTCCCAACGAGAACAAATCC
Print the CRISPR sequence : From position
bp To position
bp