CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_009089_15
Flanking alignement tool
Page manual
  
Home Page
NC_009089_15                                                                                                                 
top
Strain :
Clostridium difficile 630
RefSeq :
NC_009089 (chromosome circular)
CRISPR id :
NC_009089_15
DR consensus (29 bp) :
ATTTACATTCCATATAGTTAATCTAAAAC
Number of repetitions :
4
Begin Position :
3396821
End Position :
3397048
3396821
ATTTTAAGTCCACATAGTTAATATAAAAC
CCTTTATAGATAATTTTATAGACTCTTTGTATGTACT
3396886
3396887
ATTTACATACCACATAGTTAATATAAAAT
GAAAAGAGTTTGTAGGGAAAATATTTAATGATGCAAC
3396952
3396953
CTTTACATACCACTTAGTTAATATAAAAC
AAGAACTAGCTACAAGCTTTATACAGCGTTCTCAAAC
3397018
3397019
CTTTACATACCACTTAGTTAATATAACTC
3397047
Left flanking sequence : Till position 3396821 (length
bp)
TAACAATATTATACTATATTAGTAAAATTTTTACATTATTATCACCTCCTTTCATTAAAAAAACACTTAC
TCATTTGTAAGTGTTTTTGAATTATTTTTA
Right flanking sequence : From position 3397048 (length
bp)
TATCTCTATTATACCATTTTTTAACAGACAAAGCACTTGAAACTATACAATATCCAAGTGCTTTATCTAT
ATTATTTATTCTCTTTCTTTTCTTTTTTCC
Print the CRISPR sequence : From position
bp To position
bp