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CRISPRs details
NC_009437_12
Flanking alignement tool
Page manual
  
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NC_009437_12                                                                                                                 
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Strain :
Caldicellulosiruptor saccharolyticus DSM 8903
RefSeq :
NC_009437 (chromosome circular)
CRISPR id :
NC_009437_12
DR consensus (29 bp) :
GTTTACATCCCTCATAGTTCAGATAAGAC
Number of repetitions :
40
Begin Position :
2521995
End Position :
2524601
2521995
TACAGGAATGCTCATAGTTCAGATAAGAC
TATCAACATTGAACCAAAAGCTGTTATGTTGGTCATCA
2522061
2522062
GTTTACATCCCTCATAGTTCAGATAAGAC
TAACGCAGACACGGCAACAAAAGAAAAAGCGTTGATAA
2522128
2522129
GTTTACATCCCTCATAGTTCAGATAAGAC
TAAACATTACAGGCTTTAAGGACCGATTAGGTCGCAAT
2522195
2522196
GTTTACATCCCTCATAGTTCAGATAAGAC
CCGTCGTCGTCAACAACAAACTCGAAAGACAAAAGTTG
2522262
2522263
GTTTACATCCCTCATAGTTCAGATAAGAC
CATAGATTTTGATATCACCATTTTCGGTGAGCACAAC
2522328
2522329
GTTTACATCCCTCATAGTTCAGATAAGAC
TAGCATTGTATCGTTGTAAGCGTTCTAATTCCCCTTC
2522394
2522395
GTTTACATCCCTCATAGTTCAGATAAGAC
CAGAACCCAGAACAGGCAGGTAATGAATAATGACAT
2522459
2522460
GTTTACATCCCTCATAGTTCAGATAAGAC
TGCCAAACAAGGTTGACCAGCAGGTAATTGATGAGTTT
2522526
2522527
GTTTACATCCCTCATAGTTCAGATAAGAC
GGCTAATTGCATGTTCAATAAGTACTTTTTGCCCTG
2522591
2522592
GTTTACATCCCTCATAGTTCAGATAAGAC
CATCACCTCTGGGCTACATGTCCCTCGGGCACTGGCTG
2522658
2522659
GTTTACATCCCTCATAGTTCAGATAAGAC
CAGAAAGGAGGGTAGCGGTTACATAATAGTAGTTTAGT
2522725
2522726
GTTTACATCCCTCATAGTTCAGATAAGAC
CGAGATGGGCTTGCCATTAACCTTAGCCGACCGCATCTT
2522793
2522794
GTTTACATCCCTCATAGTTCAGATAAGAC
CAACTCCTTCAGTAATAAGTGTGTCGCCTTTGTAGAGT
2522860
2522861
GTTTACATCCCTCATAGTTCAGATAAGAC
TCGCAAAGCATCCATACAATGGTCGGCTACTTTTAA
2522925
2522926
GTTTACATCCCTCATAGTTCAGATAAGAC
ACGAAGCGATGAAGCTCATCGTGTGTTCACATGAGCT
2522991
2522992
GTTTACATCCCTCATAGTTCAGATAAGAC
TCGTGAGGCCGTGAAACAAGCGAGCTTTCGTAATGCGC
2523058
2523059
GTTTACATCCCTCATAGTTCAGATAAGAC
GCGGGTCAAGACCCTGGCGGAAGCGTAGAGGCCGAAA
2523124
2523125
GTTTACATCCCTCATAGTTCAGATAAGAC
CTGGAAGCTGTCTACTGGGCGGCCCCAAAGTTACCGC
2523190
2523191
GTTTACATCCCTCATAGTTCAGATAAGAC
GGCGCGGAAGCGGGGCAGACGATGCTCACCCTGATAAA
2523257
2523258
GTTTACATCCCTCATAGTTCAGATAAGAC
CTGCGTACGCGGCATTCCCCTTGATGTTATCGCCCAGG
2523324
2523325
GTTTACATCCCTCATAGTTCAGATAAGAC
CATGAAAATCCTTGCAGCTCCCGACCTCCACTGCTTC
2523390
2523391
GTTTACATCCCTCATAGTTCAGATAAGAC
GCCCTGGACAAATTCGGCACCCCCTTAGTGGTAGCTG
2523456
2523457
GTTTACATCCCTCATAGTTCAGATAAGAC
AAGGTCAGCGATTATTGGGAAATTAAACATAATCCGA
2523522
2523523
GTTTACATCCCTCATAGTTCAGATAAGAC
ATTAGCTGAGAGTGGCACAGCACTAAGAAGGTTGATGA
2523589
2523590
GTTTACATCCCTCATAGTTCAGATAAGAC
TGCAACGTGCAACTTGACGCTGTATGTTTACAATGT
2523654
2523655
GTTTACATCCCTCATAGTTCAGATAAGAC
GCTGGTGTTGCCGCTGCTGGGTTGCATATTTTACCT
2523719
2523720
GTTTACATCCCTCATAGTTCAGATAAGAC
TACGATTTGCCTTATGCGATAGTGCAACACGAGAGAC
2523785
2523786
GTTTACATCCCTCATAGTTCAGATAAGAC
TAGAAGCTTCTACCTGCGAAAGCGTATACTTGGACC
2523850
2523851
GTTTACATCCCTCATAGTTCAGATAAGAC
GTGCCAGTTTTGGCTTTTCTAATTACACATTTAAAAC
2523916
2523917
GTTTACATCCCTCATAGTTCAGATAAGAC
CAAAAAAAATAAGCTCAGCTATTGCTGAGCAACTATA
2523982
2523983
GTTTACATCCCTCATAGTTCAGATAAGAC
ACCGAGCGATACAAAGTCGGCAGCTTGTACATTTTTA
2524048
2524049
GTTTACATCCCTCATAGTTCAGATAAGAC
TACCGGGAACTGGTGAGAAGCCAACCTTGTTAAAACC
2524114
2524115
GTTTACATCCCTCATAGTTCAGATAAGAC
CTGGTCATTCAGGGTAGAATATCACAATTTGGATAC
2524179
2524180
GTTTACATCCCTCATAGTTCAGATAAGAC
TTATTTAGAAAAGGCTATTGTGATAAATCAATATGG
2524244
2524245
GTTTACATCCCTCATAGTTCAGATAAGAC
CTTTGCTATTTCCTTTGATTATTCTATAAACTTGTGC
2524310
2524311
GTTTACATCCTTCATAGTTCAGATAAGAC
GTTATTTAGAGACACAGCAAAATTTCTTGAGAAAAA
2524375
2524376
GTTTACATCCTTCATAGTTCAGATAAGAC
ATATATGAAAAGCAGAAAAGAGATATATTGAATGCA
2524440
2524441
GTTTACATCCTTCATAGTTCAGATAAGAC
GTTTCTTCTATTGCTTTTCTCAGTTCATACGGTATATA
2524507
2524508
GTTTACATCCTTCATAGTTCAGATAAGAC
TGATGATTATTACCAACAACATACAGATATAAAAAA
2524572
2524573
GTTTACATCCTTCATAGTTCAGATAAGAC
2524601
Left flanking sequence : Till position 2521995 (length
bp)
GTTTTGTCGTAAGTTGTACAACTTACATTCTGTATTTTACCAGGAGGTACCTTATCTCTTCAAATCTCAT
TTCTCTTCATTTTCACTCATTTTCGTTCAT
Right flanking sequence : From position 2524601 (length
bp)
CCACTTTTATAAAAAACCTTGTAACTCAGTTACTACCTACAATTATACCTTATCCCATATTACTTTGCAA
TCAATATTATTTGCAGCAAAGGGGTGATAG
Print the CRISPR sequence : From position
bp To position
bp