Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_009470_1                                                                                                                 top


Strain : Acidiphilium cryptum JF-5 RefSeq :NC_009470 (plasmid pACRY04 )
CRISPR id : NC_009470_1
DR consensus (29 bp) : CCGTTCCCCGCGCACGCGGGGATGAACCGNumber of repetitions :4
Begin Position : 25677 End Position : 25888

25677CCGTTCCCCGCGCACGCGGGGATGAACCGCGCCTCGGCCAGTATGTGATCGCGGCGATCGT 25737
25738CCGTTCCCCGCGCACGCGGGGATGAACCGCTGAACATCATAGACTTTCACCGTCACCGAAA 25798
25799CCGTTCCCCGCGCACGCGGGGATGAACCGAAAGACGCCGGCAATTCAGCCGCCGCTCATTG 25859
25860CCGTTCCCCGCGTACGCGGGGATGCACTG25888
Left flanking sequence : Till position 25677 (length bp)
CGGCGAGGTGGCCTTGCCACCTCCCTTCATCCTACTACGTGCAATCGGTGGAATGGCGCCTATGGAAACT
CTTGTTCCATATCATATGGTTACAGGAAGA
Right flanking sequence : From position 25888 (length bp)
AAATATGCCGGCGGTTACGTCAGCTCAGATCAGGTGTGCGGCGACCAGCACCGCCAGAATCGCACTAATG
CCGCTCAAGACGGCGCCGCCAGCAGCGATG
Print the CRISPR sequence : From position bp To position bp