Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_013159_1                                                                                                                 top


Strain : Saccharomonospora viridis DSM 43017 RefSeq :NC_013159 (chromosome circular)
CRISPR id : NC_013159_1
DR consensus (28 bp) : GTCCGCCCCGCGCGTGCGGGGATGAACCNumber of repetitions :8
Begin Position : 1426965 End Position : 1427420

1426965GTCCGCCCCGCGCGTGCGGGGATGAACCCTCATCACCGACCACTAGGAGTTCCAGTCATGC 1427025
1427026GTCCGCCCCGCGCGTGCGGGGATGAACCGTACTCGGTGAGCGCGTGCTCGATCACCAGCTG 1427086
1427087GTCCGCCCCGCGCGTGCGGGGATGAACCGGTCGGGATGAAACGCCACCCAGGCTGGGGTGT 1427147
1427148GTCCGCCCCGCGCGTGCGGGGATGAACCTACGGATGTGCTCGATGACGGGCGTGCCACTGG 1427208
1427209GTCCGCCCCGCGCGTGCGGGGATGAACCCTGGACGGCGTCGCCCGCGTCGGGACGCCTCGG 1427269
1427270GTCCGCCCCGCGCATGCGGGGATGAACCGGTGCTCACCTCCCCAGGTTGTCATCCACCTGA 1427330
1427331GTCCGCCCCGCGCATGCGGGGATGAACCGTGGAACGGTTCGACCAGGGGCAACGGCAACTCG 1427392
1427393TCCGCCCCCGCGCATGCGGGGATGAACC1427420
Left flanking sequence : Till position 1426965 (length bp)
TGCCCACCACTCGTCTTCTCTTGGATAGTCTCTGCGTCATAAGGCGCTCAGAGTGAATGAAAAACGGGTC
GCCAGGCGGTAAACATGCAGGTCACGAAGT
Right flanking sequence : From position 1427420 (length bp)
GCTGCCAGGTACTCGACAAGGGCCTACTGGGTTCTGCCTGTGCACGCAGAAATGAATCATCAACATGGGC
AGTGTGTTTTCGGGGAACGTTCACCTCGGT
Print the CRISPR sequence : From position bp To position bp