Institut de Génétique et Microbiologie

CRISPR details


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NC_013971_1                                                                                                                 top


Strain : Erwinia amylovora ATCC 49946 RefSeq :NC_013971 (chromosome circular)
CRISPR id : NC_013971_1
DR consensus (29 bp) : GTGTTCCCCGCGTGAGCGGGGATAAACCGNumber of repetitions :36
Begin Position : 854678 End Position : 856841

854678GTGTTCCCCGCGTGAGCGGGGATAAACCGTTATTCATGAGCCTTTTTATCTTCGCGGCATG 854738
854739GTGTTCCCCGCGTGAGCGGGGATAAACCGGTAAATAGCAAAATGATAAATAATTTATCAAT 854799
854800GTGTTCCCCGCGTGAGCGGGGATAAACCGCTATGCAGAAGCGGAGGGCGGCGAGTGATGGA 854860
854861GTGTTCCCCGCGTGAGCGGGGATAAACCGAGCATCTCGGGAACTGTGTTTTTTGTATAAAA 854921
854922GTGTTCCCCGCGTGAGCGGGGATAAACCGAAGATGCTTTGACATTAATTATCTCCATAAAA 854982
854983GTGTTCCCCGCGTGAGCGGGGATAAACCGCAAGCGATCAACCTGTTTTTCAGTAGGTTTAA 855043
855044GTGTTCCCCGCGTGAGCGGGGATAAACCGGATTGCGCATGAGCACTGAAATTGTTCACAGC 855104
855105GTGTTCCCCGCGTGAGCGGGGATAAACCGGATTGCGCATGAGCACTGAAATTGTTCACAGC 855165
855166GTGTTCCCCGCGTGAGCGGGGATAAACCGACAAAAGACAACACCCCCCTTACCCCCCCACG 855226
855227GTGTTCCCCGCGTGAGCGGGGATAAACCGCAGGTATTTCGGATAGCCGGTTGTCTCGGCGG 855287
855288GTGTTCCCCGCGTGAGCGGGGATAAACCGACTGAAATTTAAAATCACCGCTAACCCGCCAG 855348
855349GTGTTCCCCGCGTGAGCGGGGATAAACCGGGCGATGAGGGAGTACGCGGAGCGGCAGGGTA 855409
855410GTGTTCCCCGCGTGAGCGGGGATAAACCGAAAAGCCAACCGCCCGCCCGTAATAAACCTGA 855470
855471GTGTTCCCCGCGTGAGCGGGGATAAACCGGTTGCAGAGACTTAAAGATCGTCTGCTAGTTA 855531
855532GTGTTCCCCGCGTGAGCGGGGATAAACCGTAAAGGAGCATGCTTATACAACTGACAAAATC 855592
855593GTGTTCCCCGCATGAGCGGGGATAAACCGAGATTTGGCGGAAATGTCGGCGGAGATGCCCC 855653
855654GTGTTCCCCGCGTGAGCGGGGATAAACCGAAATGTCCTGTGGCTCGGCCCGATGCTGCAAT 855714
855715GTGTTCCCCGCGTGAGCGGGGATAAACCGGAGATCATTCTCATCCCTCATGTTTTCCAGGA 855775
855776GTGTTCCCCGCGTGAGCGGGGATAAACCAATTGTAAAATCCTCTCCGCCAAATTTGATTAC 855836
855837GTGTTCCCCGCGTGAGCGGGGATAAACCGAAACTCTCGCATACATGGACGGAATTTAACGA 855897
855898GTGTTCCCCGCGTGAGCGGGGATAAACCGACGATTTGCCTGAAACCTCAACGAAGTTCGAC 855958
855959GTGTTCCCCGCGTGAGCGGGGATAAACCGCTGATGGCGTCACGAGCCATACGGAATGTGAC 856019
856020GTGTTCCCCGCGTGAGCGGGGATAAACCGCAAAAATTTGCGCATGTCATCTATCTTTTTTT 856080
856081GTGTTCCCCGCGTGAGCGGGGATAAACCGCCCTCGGGGAGGGCTTTGCGTTGTTACTCAGA 856141
856142GTGTTCCCCGCGTGAGCGGGGATAAACCGGTTACGTTGAATGTATCGTTGGATGTGATTAA 856202
856203GTGTTCCCCGCGTGAGCGGGGATAAACCGTACATCGAACAATGCCAATTGTTGACGTTCTT 856263
856264GTGTTCCCCGCGTGAGCGGGGATAAACCGCCGCGAAAATCCGCAGTGAGCTGGCAATGAGC 856324
856325GTGTTCCCCGCGTTAGCGGGGATAAACCGGCTGTCTATCTGGGCTGCCTCTATCCAGCAAT 856385
856386GTGTTCCCCGCGTGAGCGGGGATAAACCGACTTCGGTGAGAATGTCGAATTGCCACCAGAT 856446
856447GTGTTCCCCGCGTGAGCGGGGATAAACCATTGAATCAGAGTCTTTCAGGGACGATGTTTTC 856507
856508GTGTTCCCCGCGTGAGCGGGGATAAACCGTGAAGCAGCCAGAATCCCATCCGGCCTTTATC 856568
856569GTGTTCCCCGCGTGAGCGGGGATAAACCGGCTTTTGTACCCTTTACAGTCAACGTACTGCT 856629
856630GTGTTCCCCGCGTGAGCGGGGATAAACCGAGATTGAGATCTTATCAACGGACTCTGACGCC 856690
856691GTGTTCCCCGCGTGAGCAGGGATAAACCGTTTCTTCACACACAACGGTGAGGGCATTGTCT 856751
856752GTGTTCCCCGCGTGAGCGTGGATAAACCGTGATAAAGTAACGTTCCGAATGGCGCGTGATG 856812
856813GTGTTCCCCGCATGAGCGGGATAAACCGC856841
Left flanking sequence : Till position 854678 (length bp)
CGTTTTGAGTAGCAAATCCGTGCGTGCTTTAAAGTGGAAAAAAGTTGGTAGAATTGTAGGGCGGTAAAAA
AATCACTAAGATCAGTCAGATAGTTTTAGA
Right flanking sequence : From position 856841 (length bp)
CATGCCGGACAGTATTGAGCAACTGGCCGACGCCGCTTTACAGGCGCTGGATACCATATGTGACAAACAG
ATCGCGTTTTTTGGTCACAGCATGGGGGGA
Print the CRISPR sequence : From position bp To position bp