Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_014029_4                                                                                                                 top


Strain : Yersinia pestis Z176003 RefSeq :NC_014029 (chromosome circular)
CRISPR id : NC_014029_4
DR consensus (28 bp) : GTTCACTGCCGCACAGGCAGCTTAGAAANumber of repetitions :5
Begin Position : 2951925 End Position : 2952194

2951925GTTCACTGCCGCACAGGCAGCTTAGAAACTGATACAATCATCCTATTTGTCCTATCCAGAA 2951985
2951986GTTCACTGCCGCACAGGCAGCTTAGAAAGACAAGAACCGAATCTTTCGCCGTGCCGTAAA 2952045
2952046GTTCACTGCCGCACAGGCAGCTTAGAAACCGAAATCATCAGATGTAATTAAGATTTTTGCT 2952106
2952107GTTCACTGCCGCACAGGCAGCTTAGAAAAGACTGATGCAAGATGGCGGTATGCGTACAGA 2952166
2952167GTTCACTGCCGCACAGGCAGCTTATAGA2952194
Left flanking sequence : Till position 2951925 (length bp)
TGATTTTATATCCTGCTTACCGAGGGTTAAAAAAAATCATTTTTTACCCTTTGGCGAAAGAATTATTTTA
CAAACAGTCTGTTACCCGTATTATCTTACT
Right flanking sequence : From position 2952194 (length bp)
GGGTCACTGTCTGTGCGCCAGCGCGGCCCCGGCCTGCGCCTCCTGCTGGTAGGCCAACGCCACGACCAGC
GACTGCACTAGACAGAGCGTGGCTGATTGA
Print the CRISPR sequence : From position bp To position bp