Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_014212_4                                                                                                                 top


Strain : Meiothermus silvanus DSM 9946 RefSeq :NC_014212 (chromosome circular)
CRISPR id : NC_014212_4
DR consensus (35 bp) : GTCGCAAACCAAAAGCCCCGTAAGGGGATTGCAACNumber of repetitions :3
Begin Position : 2317014 End Position : 2317192

2317014GTCGCAAACCAAAAGCCCCGTAAGGGGATTGCAACAGATCCCGGCGAGATTGACCCCTCAACAGTAGTAA 2317083
2317084GTCGCAAACCAAAAGCCCCGTAAGGGGATTGCAACACAAATCCGGGTACGCTCACTACCCTCCCCCCCTCGTCC 2317157
2317158GTCGCAAACCAAAAGCCCCGTAAGGGGATTGCAAC2317192
Left flanking sequence : Till position 2317014 (length bp)
GGTCTTTACGAGCCAGGGTCAACCTCAAAATCGCTGCCCACAACCTCATGCACTCAGGTGTGTTGGTCTG
ACTTCAGGTAGCAAACGAGGTTATTCTTTT
Right flanking sequence : From position 2317192 (length bp)
TGGGCCACCACTGTTGCTGAGAACAGAATCGTCTCGTTTGCTGCCTGAACTCCGCCCCACACCCCCGATG
TGGAGGAGGTTGCGGGCAGCGACTTGGAGG
Print the CRISPR sequence : From position bp To position bp