Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_014926_4                                                                                                                 top


Strain : Thermovibrio ammonificans HB-1 RefSeq :NC_014926 (chromosome circular)
CRISPR id : NC_014926_4
DR consensus (28 bp) : GTTTTATCTGAACAAGTGGGATTTAAACNumber of repetitions :4
Begin Position : 1049961 End Position : 1050183

1049961GTTTTATCTGAACAAGTGGGATTTAAACCTCTTCTTTAAGAACTCCCTTACGGTCTCAAGGTCGCC 1050026
1050027GTTTTATCTGAACAAGTGGGATTTAAACGTCGTCATATAGGGAACGCAAGTTCATCTCCTCCCCCG 1050092
1050093GTTTTATCTGAACAAGTGGGATTTAAACTTGCGCTAAAACGTCGTTCCGTAGGCCCTGTTAAA 1050155
1050156GCTTTATCTGAACAAGTGGGCTCTAATC1050183
Left flanking sequence : Till position 1049961 (length bp)
AACTTAATGGAGGTCCGCTGCACTTAACCCCTTTCTCAGAGGTTTGTTATAATGGAGAAAGTGTTGTAGT
TCTTTAACTTGAGAATATGGCCAAAGGTTG
Right flanking sequence : From position 1050183 (length bp)
ACTCACAGTTTCCCAACATACCCCAGCTCTTCAAGTGAGATTAATTTCTTTCCCTATTTATCTACCTCAA
AGCTGACCCCCATATCAGCGTTAAAATAAC
Print the CRISPR sequence : From position bp To position bp