Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_015416_6                                                                                                                 top


Strain : Methanosaeta concilii GP-6 RefSeq :NC_015416 (chromosome circular)
CRISPR id : NC_015416_6
DR consensus (37 bp) : GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATNumber of repetitions :18
Begin Position : 2854178 End Position : 2855494

2854178GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATGGAATCCGGCCTTTGGTGGTCCGGCAAAGTGCGAACGC 2854252
2854253GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATATATAGACGAACTCCAGGATTTTGCTAACCAGGCATCG 2854327
2854328GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATATCTGGGTAGGTGGTGGCGGCACTGAGGATGATTAC 2854400
2854401GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATCTCCAAAATCATGAATTACCATTACATGAATTATATTAT 2854476
2854477GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATTTCCGCAGCTGGCCTGGAGGCTTACCAAGCCATTCTTCCT 2854553
2854554GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATCGGCGGGATAACTAGTCGATCCCAGGCCGGAAGTGTTCC 2854629
2854630GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATCCCAACGGCTTGAGCATTCCAGCAAGTCCGCTAGCTGG 2854704
2854705GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATTTTCGAAGACATCCCGCGAAACATCTCTGAGAACATT 2854778
2854779GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATGCACGATAGCGACAAGGTGACCGACAGAACGACCGCCCA 2854854
2854855GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATGTATAAAGTGGCTGAGAAGTATTACGAGCCTGCCAAATA 2854930
2854931GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATAAAGGAATCCAGTTCGGTGCGTGGATCGCTGTCATCAC 2855005
2855006GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATGTATCGAGCAGCTCCCTCTAGATACTGATCGGCTGGCATA 2855082
2855083GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATTTGGTCTGGACGAGGATCGTTCCATTGGTTTGAAGGAATC 2855159
2855160GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATGGGTACAGGTATGACCTGGGGCATGGACGATCGTGAT 2855233
2855234GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATCATACCGCCGGGGGCTTCTCTTTATGCCCCGGATGTGT 2855308
2855309GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATAGCTGATCAACGATTCTGCCAGCCAGGGCTTCAAAAAG 2855383
2855384GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAATCGGCTCATACGGCATGGATGCCCTAACCAAGATGGT 2855456
2855457GTTTCAATTCCCTTTTCATCGGGATAGGCTCTGCAAT2855493
Left flanking sequence : Till position 2854178 (length bp)
CATTCAGCTCTCAATTACAGATCTCCGGTTCAGTTCGAAGTGGAGGTTGCCTTAAATACCATTGCTTAAC
TATTTGTCCATTATCAGGGGTGCAGTCCAC
Right flanking sequence : From position 2855494 (length bp)
ATATCATCAATCCTGAATTAGGGTAGCGTATCATTTTTGCTGTAAAATTTGCAGAAATATCAGTAACAAG
AACTGACTTGCTCTTCACGAGATAACAGCA
Print the CRISPR sequence : From position bp To position bp