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CRISPRs details
NC_015512_3
Flanking alignement tool
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NC_015512_3                                                                                                                 
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Strain :
Haliscomenobacter hydrossis DSM 1100
RefSeq :
NC_015512 (plasmid pHALHY02 )
CRISPR id :
NC_015512_3
DR consensus (37 bp) :
GTCGCGATTCGAAGAGGAAACAGGCTCTTGGTGCACC
Number of repetitions :
17
Begin Position :
80405
End Position :
81484
80405
GTCGCGTTTCGAAAAGGAAACAGGCTCTTAGTGCACC
TTCATTCTTCCATCATAGCGCCTTGTTT
80469
80470
GTCGCGATTCGAAAAGGAAACAGGCTCTTGGTGCACC
TATAATATTTTCAACCTTAAAAAACAAT
80534
80535
GTCGCGATTCGAAAAGGAAACAGGCTCTTGGTGCACC
TTCTAAACTTGTATCACTATGGATCCATTAGAA
80604
80605
GTCGCGATTCGAAGAGGAAACAGGCTCTTGGTGCACC
TCTTCTTTGCACTCTTCAACTGCTTCAAC
80670
80671
GTCGCGATTCGAAAAGGAAACAGGCTCTTGGTGCACC
TCATCTTTCGCTTTATTTTTGTCGATT
80734
80735
GTCGCGATTCGATAAGGAAACAGGCTCTTGGTGCACC
AAGTACATATTTAAAAACCTTTAAAA
80797
80798
GTCGCGATTCGAAGAGGAAACAGGCTCTTGGTGCACC
TTTTCTTAACCCCGGTTTGCAAGAGT
80860
80861
GTCGCGATTCGAAGAGGAAACAGGCTCTTGGTGCACC
ATATATTTCTTCTCTTTGTGTGTGTTTT
80925
80926
GTCGCGATTCGATAAGGAAACAGGCTCTTGGTGCACC
ATTCTCTTAGCTTCTTCAGCTTATAT
80988
80989
GTCGCGATTCGATAAGGAAACAGGCTCTTGGTGCACT
TGTTTTAATGTGGGTGAATTGTTCATTT
81053
81054
GTCGCGATTCGAAGAGGAAACAGGCTCTTGGTGCACC
ACCATGAAAATAACTAAATATACCATGAAA
81120
81121
GTCGCGATTCGAAGAGGAAACAGGCTCTTGGTGCACC
TGTTATTTAATTTTTTTACAGTTTTTTT
81185
81186
GTCGCGATTCGAAGAGGAAACAGGCTCTTGGTGCACC
GACCTAATCGGCATTTCTTGTTTCAAAAA
81251
81252
GTCGCGATTCGAAGAGGAAACAGGCTCTTGGTGCACC
AAGGAGAGAGAACAAGTCCACAGTCAAAA
81317
81318
GTCGCGATTCGAAGAGGAAACAGGCTCTTGGTGCACC
AACCTATTTTTATGAAATATTTGTTT
81380
81381
GTCGCGATTCGAAGAGGAAACAGGCTCTTGGTGCACC
TGATATTCGTATATTATTTCATAACTTAAT
81447
81448
GTCGCGATTCGAAGAGGAAACAGGCTCTTGGTGCACC
81484
Left flanking sequence : Till position 80405 (length
bp)
GGATTGGTCTGGAAGGTTGATTTGGGAAAGGATGAGGTTTTTGAGGCGGGTATAGGTGCTTAAGGTGACA
GTTGAAGCAACCGCAAGGGTTGCCCCAACT
Right flanking sequence : From position 81484 (length
bp)
CTATATTTTTTCAATAAATTGAAAATCAATAGCTAATGGGCGAAATAATTCCAGGATCATTGTTATCACA
AGCTCTTTACGAGGCAAAGTCGATGAGCAG
Print the CRISPR sequence : From position
bp To position
bp