Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_015519_2                                                                                                                 top


Strain : Tepidanaerobacter sp. Re1 RefSeq :NC_015519 (chromosome circular)
CRISPR id : NC_015519_2
DR consensus (30 bp) : GTTTATAGCCTACCTATAAGGAATTGAAACNumber of repetitions :19
Begin Position : 131159 End Position : 132392

131159GTTTATAGCCTACCTATAAGGAATTGAAACTATTTTCTTTTTTTATGCATCATAGACACTTCAAGT 131224
131225ATTTATAGCCTACCTATAAGGAATTGAAACGGGAAAATACAGGTAAGGAATTGTTTATAAATGCGAA 131291
131292GTTTATAGCCTACCTATAAGGAATTGAAACTCACCAGGAACAAAATCAATTTCAGCAATCGATGAA 131357
131358GTTTATAGCCTACCTATAAGGAATTGAAACAACGATATAAAAGTCAAAGATACTGATGTCATAGTGG 131424
131425GTTTATAGCCTACCTATAAGGAATTGAAACTCTCTTTCAGCAAATCTACGGGCTATCCTCTTGGCGTA 131492
131493GTTTATAGCCTACCTATAAGGAATTGAAACGTGCTGAGCCGCTAAATGTGATTGTGCTGTTTACTTT 131559
131560GTTTATAGCCTACCTATAAGGAATTGAAACTCTGTTCCGTATCCTTTTTGCCATAAACCAGTTTTGT 131626
131627GTTTATAGCCTACCTATAAGGAATTGAAACATTGCTTCTTCAACACCTTTTTCAATTCCAGTGTG 131691
131692GTTTATAGCCTACCTATAAGGAATTGAAACGTAGATAGAAACCCATACTTAGATAGAAGCCTTCTTAAC 131760
131761GTTTATAGCCTACCTATAAGGAATTGAAACACCAATGCAGTTAAATAAACTTTTTAATGATCTACTAA 131828
131829GTTTATAGCCTACCTATAAGGAATTGAAACGTAATTATGGGGCCTTTTATTATCCTAACGTCAAGAG 131895
131896GTTTATAGCCTACCTATAAGGAATTGAAACCATTTTATGCAGAAGAGGATGGATTAGACTTTGAAGA 131962
131963GTTTATAGCCTACCTATAAGGAATTGAAACTCTTCTCTCCGTTGTCTTTGTTTCGCTGTCTCCCTCTC 132030
132031GTTTATAGCCTACCTATAAGGAATTGAAACGTCCAATCGGTCTTTACCTCCACCATTTGAAACCTC 132096
132097GTTTATAGCCTACCTATAAGGAATTGAAACTCATCATGGTTATCCAGCTTATTAACGAGCTGGGCC 132162
132163GTTTATAGCCTACCTATAAGGAATTGAAACTATCATCAGCCGCCGCTCCTTCCGCCGGTATGAATT 132228
132229GTTTATAGCCTACCTATAAGGAATTGAAACTTTGGTATGATTTTCAGGGTGTTGGTGGTAGAACAG 132294
132295GTTTATAGCCTACCTATAAGGGATTGAAACAAATATTCTTTTTTAAGGCATCGCATATCCTCAAGCAA 132362
132363GTTGTTAACATACCTATAAAGGCTTGAAAT132392
Left flanking sequence : Till position 131159 (length bp)
TGGAAAAGAAGGACTTTTCGATTTAATGCAGAAATTATTAATAGAAAATTGAACAAATTATTTTTCTCGC
TCTTTCTTTATTTTTTACCCCAAATTACGG
Right flanking sequence : From position 132392 (length bp)
AACACCGTATGTAATATATATATTTGGTTTATGGTTTTCTATGGATGGATGTGCATTAAAAAAATATGTG
TTAATGTGTAGAGGCGGTCGATGACCGCCT
Print the CRISPR sequence : From position bp To position bp