Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_015587_4                                                                                                                 top


Strain : Hydrogenobaculum sp. SHO GCF_000215065 RefSeq :NC_015587 (chromosome circular)
CRISPR id : NC_015587_4
DR consensus (30 bp) : GAGTTTCATCTGAACCGTGTGGGTTAAGAANumber of repetitions :3
Begin Position : 346996 End Position : 347157

346996GGGTTTCATCTGAACCGTGTGGGTTAAGAAGCACAACACCTTTGCCGTTTACAAGCACGTTTGAA347060
347061GAGTTTCATCTGAACCGTGTGGGTTAAGAAGCTGATTTGACAGCATCAAATACAGTTGCAATAATCT347127
347128GAGTTTCATCTGAACCGTGTGGGTTAAGAA347157
Left flanking sequence : Till position 346996 (length bp)
CAGAATCTGGCATTTTCGGAAAATTACCTTCATTTGCGGGGGGGTACCCCCTTGACAAAACCATTGATAC
ACTATATAATATTAGGAGTAGTGATTTCTG
Right flanking sequence : From position 347157 (length bp)
AAAGAAAACGTATTGTATAAGTTCAGATAGACTGAACATAGAGTGCCTGAGCATGTTTCAGATGCCTGTC
TTCTTAAAAGACACTAATCTCATGATGTAA
Print the CRISPR sequence : From position bp To position bp