CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_015589_10
Flanking alignement tool
Page manual
  
Home Page
NC_015589_10                                                                                                                 
top
Strain :
Desulfotomaculum ruminis DSM 2154
RefSeq :
NC_015589 (chromosome circular)
CRISPR id :
NC_015589_10
DR consensus (30 bp) :
GTTTCAAATCCTTATAGGTAGACTAGTAAC
Number of repetitions :
50
Begin Position :
3057773
End Position :
3061057
3057773
GTTTTGAATTTTTATACGTAAGCTAGTAAC
ATAGAAAACCGCCCTTTTCGGACGGTTCTTCTTGTT
3057838
3057839
ATCTCAAATCCTTATAGGTAGGCTAGTAAC
TTTTCTGGTCCCCGATCATGCCAGCAGGGATGTAGTTTT
3057907
3057908
GTTTCAAATCCTTATAGGTAGGCTAGTAAC
TTAACGCCACAGCTTTTGATCCTAAAAACTACATTGG
3057974
3057975
GTTTCAAATCCTTATAGGTAGACTAGTAAC
CACCTTGTAGTAGTAGGTCAATCTCGATCTCTCCCTCC
3058042
3058043
GTTTCAAATCCTTATAGGTAGACTAGTAAC
CGAGGAAGCAGAGTTTCATGCTGGTGATGTATTAGAG
3058109
3058110
GTTTCAAATCCTTATAGGTAGACTAGTAAC
CCTAATCCGCCTGATGTGGCTTTGGCCTTTCGGTTTAA
3058177
3058178
GTTTCAAATCCTTATAGGTAGACTAGTAAC
TTCAGGTTCTTCCATGCTTCCACAATAGAGTCAAC
3058242
3058243
GTTTCAAATCCTTATAGGTAGACTAGTAAC
TTTACGATACCGTCCCAAGCTTGTTGCACTGTTCCAT
3058309
3058310
GTTTCAAATCCTTATAGGTAGACTAGTAAC
TCCCATTCCACATAGTTGGTCACTTCCACCCGTCCGT
3058376
3058377
GTTTCAAATCCTTATAGGTAGACTAGTAAC
GATATTACTAAAAAATATGGTGATGTTGTTGCATTAT
3058443
3058444
GTTTCAAATCCTTATAGGTAGACTAGTAAC
AAAACTCTTCTTTCAGCTTCGGCGGCTGCAGTTTGGA
3058510
3058511
GTTTCAAATCCTTATAGGTAGACTAGTAAC
CCACACTGGTTTTGCTCAGCAGTTGCTTAATCTC
3058574
3058575
GTTTCAAATCCTTATAGGTAGACTAGTAAC
GGCTGCAAGGATGCCGTAAACGTCGCCATAGAGGATG
3058641
3058642
GTTTCAAATCCTTATAGGTAGACTAGTAAC
TCGTATAGGCTCATGACACGAACCACCCTTTGCGT
3058706
3058707
GTTTCAAATCCTTATAGGTAGACTAGTAAC
GTTGGAGATAAATAGGATCCGGTTATCCGCCCCTG
3058771
3058772
GTTTCAAATCCTTATAGGTAGACTAGTAAC
TTCCTACTAAGGATAATCTTGCCCATTTTGCCCAGG
3058837
3058838
GTTTCAAATCCTTATAGGTAGACTAGTAAC
ATGCCAACGCACCGACAAAGAAAACATTGAGATGCT
3058903
3058904
GTTTCAAATCCTTATAGGTAGACTAGTAAC
GTCTCAGTAGACAAAGAAAATGACACATATGACGGA
3058969
3058970
GTTTCAAATCCTTATAGGTAGACTAGTAAC
ATCGAAAACCGGGCCGTCAAATAGACATTGACCATCCC
3059037
3059038
GTTTCAAATCCTTATAGGTAGACTAGTAAC
TGATTATTACCTATGCGCACAACCACGTTATTGTG
3059102
3059103
GTTTCAAATCCTTATAGGTAGACTAGTAAC
AATGCCAGGAGAACGTCTTATTGATGCTCTTGTAGA
3059168
3059169
GTTTCAAATCCTTATAGGTAGACTAGTAAC
TATTGCGGACTTTCTCCAATCCCTGGTCAGCAGCCAG
3059235
3059236
GTTTCAAATCCTTATAGGTAGACTAGTAAC
AATTACCGCAAATATTAGTCATATAGAACTAACTAA
3059301
3059302
GTTTCAAATCCTTATAGGTAGACTAGTAAC
AGAAGATATATTTTTAAAAATGAATCAAATGACTCC
3059367
3059368
GTTTCAAATCCTTATAGGTAGACTAGTAAC
GTATGAACGCTGCTTAGATCAAGTGGATCATTTTG
3059432
3059433
GTTTCAAATCCTTATAGGTAGACTAGTAAC
GATCGACATAGCAGTCACAAGGCTGCGAGAGTGTG
3059497
3059498
GTTTCAAATCCTTATAGGTAGACTAGTAAC
AGTCCGTTATCGTTTAACCATTGGCTGATTTTGTCAA
3059564
3059565
GTTTCAAATCCTTATAGGTAGACTAGTAAC
ATGGAAAGTAAGCCTTTGGATATAACGATCATCATT
3059630
3059631
GTTTCAAATCCTTATAGGTAGACTAGTAAC
AGAATGAAAGAATTTGGACTGAAATTTTCAGTAGAA
3059696
3059697
GTTTCAAATCCTTATAGGTAGACTAGTAAC
TAAACTACAAGCACTTAAACAACTCAAAGCAGGGGA
3059762
3059763
GTTTCAAATCCTTATAGGTAGACTAGTAAC
GTCCATCCACGGGCAGAAAACGCCAGTTTGTATACG
3059828
3059829
GTTTCAAATCCTTATAGGTAGACTAGTAAC
TTTCATCTTTACCTGGGTTAGGCGAGGAAGACAATA
3059894
3059895
GTTTCAAATCCTTATAGGTAGACTAGTAAC
GCGATAAATCTCTTTCAAGTCTTTTTTTCTTGATG
3059959
3059960
GTTTCAAATCCTTATAGGTAGACTAGTAAC
GATTTTCCTTGCCTTCACCGCTTGTTTTCTTGACTT
3060025
3060026
GTTTCAAATCCTTATAGGTAGACTAGTAAC
TCTGCCGCAAGTGCGCGGAGGAGATCGAGATAGGTGGCTC
3060095
3060096
GTTTCAAATCCTTATAGGTAGACTAGTAAC
AGTTTGACATCTCCCTGAAACAAGTCCGAATCGCGG
3060161
3060162
GTTTCAAATCCTTATAGGTAGACTAGTAAC
CATGTAGTCCGGAAACCAATGCCAGCCCACGTATTCACA
3060230
3060231
GTTTCAAATCCTTATAGGTAGACTAGTAAC
GAAATGTTGTTGCGTATGGCTTTTGTTCCATCTGGA
3060296
3060297
GTTTCAAATCCTTATAGGTAGACTAGTAAC
AAGCCTCTCTTCCCTGCGTTCGTTGTGACGTAGCACA
3060363
3060364
GTTTCAAATCCTTATAGGTAGACTAGTAAC
ATGCTCTGCAGGACCCAAATGTAATCAAACACGCTTA
3060430
3060431
GTTTCAAATCCTTATAGGTAGACTAGTAAC
CCATTTAGAATAATTCTTGCAGTGCGACCTAAACGGT
3060497
3060498
GTTTCAAATCCTTATAGGTAGACTAGTAAC
TTCTTTGATGCGTTTTTGTCTGTCATCTTGGCATCG
3060563
3060564
GTTTCAAATCCTTATAGGTAGACTAGTAAC
GTGCTACGCGTCGAATGTCACTGTCATTCCGTACA
3060628
3060629
GTTTCAAATCCTTATAGGTAGACTAGTAAC
AAATGTTGTTGCGTATGGCTTTTGTTCCATCTGGA
3060693
3060694
GTTTCAAATCCTTATAGGTAGACTAGTAAC
AGTCTTTTCTCCCCTGGTTTCAGTTCTTACAATGCGG
3060760
3060761
GTTTCAAATCCTTATAGGTAGACTAGTAAC
TTGTTGCCTTCATGTTTAATCCGAAAGACTATATCCT
3060827
3060828
GTTTCAAATCCTTATAGGTAGACTAGTAAC
GGCCGCCTTCTGCACCGCAGATAAAGCAGACTGGTAA
3060894
3060895
GTTTCAAATCCTTATAGGTAGACTAGTAAC
GTGCTAAAACATTCGTCGGTTGTCTTTCTACATAT
3060959
3060960
GTTTCAAATCCTTATAGGTAGACTAGTAAC
TTAATCGTCGTCGGCTTATACCGACGACAACATCCGAT
3061027
3061028
GTTTCAAATCCTTATAGGTAGACTAGTAAC
3061057
Left flanking sequence : Till position 3057773 (length
bp)
AATTGTAGAATTAAAGTTCGGAATAATTATGGAAAAAATATGGTAAATTGTAAAACTTTATGTATTTTAT
ATTTTCCCTAACACCCCAGCATTCCTTGGA
Right flanking sequence : From position 3061057 (length
bp)
CCGTCGGAACCCGCTAATTTAAAGACATGTTAAAAATAGCTTCATGTCCTTTTTAATTTCCTAATTTTTC
AAATCCCTTTCATTCCAAGGGTTTTATCTT
Print the CRISPR sequence : From position
bp To position
bp