CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_015636_1
Flanking alignement tool
Page manual
  
Home Page
NC_015636_1                                                                                                                 
top
Strain :
Methanothermococcus okinawensis IH1
RefSeq :
NC_015636 (chromosome circular)
CRISPR id :
NC_015636_1
DR consensus (30 bp) :
ATTTCCATCCATCAATGGTCTGATTTTAAC
Number of repetitions :
25
Begin Position :
103466
End Position :
105101
103466
ATTTCCATCCATCAATGGTCTGATTTTAAC
AGAAAATTAACAGCAAAAATTGAAAATGTAAAAATAGT
103533
103534
ATTTCCATCCATCAATGGTCTGATTTTAAC
ATAAAATGTTTTAAATTTATTATATGATTCATCTCC
103599
103600
ATTTCCATCCATCAATGGTCTGATTTTAAC
GCAGTAGAAGAGATAATTATAATTAAAGAGCTCAA
103664
103665
ATTTCCATCCATCAATGGTCTGATTTTAAC
TATCAATTTGAATGTATTATATCAGTTGATACTAAAAT
103732
103733
ATTTCCATCCATCAATGGTCTGATTTTAAC
AAGTGCAGATATTCTTTCAATGATAGCAAAATCGTT
103798
103799
ATTTCCATCCATCAATGGTCTGATTTTAAC
TTAAAAGTTCGTGCAGAAAAAACCTAACTTTCCTTGC
103865
103866
ATTTCCATCCATCAATGGTCTGATTTTAAC
TTAAAGAACCAACATTAAAAGAATACATATTAAAAGTAT
103934
103935
ATTTCCATCCATCAATGGTCTGATTTTAAC
AAAATAAGCGAAATAATAACCTATGTTAATAAAAAA
104000
104001
ATTTCCATCCATCAATGGTCTGATTTTAAC
GGACAAATACTTCAAATTATTGAGAGTATTTTAT
104064
104065
ATTTCCATCCATCAATGGTCTGATTTTAAC
CTTATGTCTTTTTTTAGTTTGGCTTGCGGATGGTCGT
104131
104132
ATTTCCATCCATCAATGGTCTGATTTTAAC
GATAAATTTAAAACACATGATTTTGTTAAATTTTTTA
104198
104199
ATTTCCATCCATCAATGGTCTGATTTTAAC
AGTCGTTAAAAAATTATCTAAAAAATTATCTAAAAAA
104265
104266
ATTTCCATCCATCAATGGTCTGATTTTAAC
TATCACATCCGTTAAAGCATATGTAGTTGATGATTC
104331
104332
ATTTCCATCCATCAATGGTCTGATTTTAAC
GTTATTGATGTTGATAACTTATACAGTAGGCTAA
104395
104396
ATTTCCATCCATCAATGGTCTGATTTTAAC
ATAGTAGTTTGTAATTAACATCTGTTTTAGTTTAGG
104461
104462
ATTTCCATCCATCAATGGTCTGATTTTAAC
CTGGAAATTTCCAGCAAGAAGTTTAAACGGATATGTT
104528
104529
ATTTCCATCCATCAATGGTCTGATTTTAAC
TTAGGAACTACAACACCAATTGATTTTTTATTACCAGA
104596
104597
ATTTCCATCCATCAATGGTCTGATTTTAAC
AAAAATGAAATAAGTTTAACTGAATTATGTGTTTCATC
104664
104665
ATTTCCATCCATCAATGGTCTGATTTTAAC
TGTGTTCACCTCATACGTATCTAATATATTGGTGAATT
104732
104733
ATTTCCATCCATCAATGGTCTGATTTTAAC
GGAAGAGATATTGGAATGTCCAGGTGGGGCATACCATTACTCCA
104806
104807
ATTTCCATCCATCAATGGTCTGATTTTAAC
ATTTTTAGGGGTTGTTGGTTTTACAGTTTTTCTTTTA
104873
104874
ATTTCCATCCATCAATGGTCTGATTTTAAC
AATCATCCCTATTATATTAGCCGCTATCATCATCTT
104939
104940
ATTTCCATCCATCAATGGTCTGATTTTAAC
CGGGGGTTACCACAACCACCACCATTACACATATAG
105005
105006
ATTTCCATCCATCAATGGTCTGATTTTAAC
TAATAGAAATATAAACCCTGAAGAATGCGAAGAATA
105071
105072
ATTTCCATCCATCAATGGTCTGATTTTAAC
105101
Left flanking sequence : Till position 103466 (length
bp)
ATGGACAATCCTTCAACCATTTTAAAAGATTTATTTAAAAGATTTTTGGGTATTAATTGAATTTATATCC
TTTTAAAATAAACTATTTTTCTTTATTTAG
Right flanking sequence : From position 105101 (length
bp)
AGTTCAAAAATTTTCTTATTTTCTATAAAATACCTTTGCATTACCCCTATATAAACCTTGCATCTCGAAT
CACATTGATTTTTGTTATTTATATAGTTTT
Print the CRISPR sequence : From position
bp To position
bp