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CRISPRs details
NC_015680_1
Flanking alignement tool
Page manual
  
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NC_015680_1                                                                                                                 
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Strain :
Pyrococcus yayanosii CH1
RefSeq :
NC_015680 (chromosome circular)
CRISPR id :
NC_015680_1
DR consensus (29 bp) :
GTTTCCGTAGAACGTAATCGTGTGGAAAG
Number of repetitions :
25
Begin Position :
32424
End Position :
34078
32424
GTTTCCGTAGAACGTAATCGTGTGGAAAG
AATTTGTCAATACTCCATGTCATAGCCCTCACCACCGT
32490
32491
GTTTCCGTAGAACGTAATCGTGTGGAAAG
TGTAACTATTGAAGAATTCAACGAAGCTATTAATGAA
32556
32557
GTTTCCGTAGAACGTAATCGTGTGGAAAG
TTCTCTTCGCCTCTTCCCACAACCCCCATCCCATTAAT
32623
32624
GTTTCCGTAGAACGTAATCGTGTGGAAAG
GTGGATATGTGGGAGGAGGATGGTGCCCTTATCGT
32687
32688
GTTTCCGTAGAACGTAATCGTGTGGAAAG
AGATTGCACCAACAGGTTATCGCATTACTACAGGTG
32752
32753
GTTTCCGTAGAACGTAATCGTGTGGAAAG
TTCATGGTCATCACCCTAATAAATAACAGCGTAACCCTCCC
32822
32823
GTTTCCGTAGAACGTAATCGTGTGGAAAG
GCTGACTTTCTTGTTGTAGCAGTTGCTGAAGAGGTCGC
32889
32890
GTTTCCGTAGAACGTAATCGTGTGGAAAG
TGTACGGTGTCAGCATGGTCTTCGTCATGGTCTTCTTCGGTGT
32961
32962
GTTTCCGTAGAACGTAATCGTGTGGAAAG
CCACTCCCACCACCCCCACGCATAATAAAAGAACAGGAAT
33030
33031
GTTTCCGTAGAACGTAATCGTGTGGAAAG
CTGCTGATGGAAAAACATTCTACATCTGGCCTGAGG
33095
33096
GTTTCCGTAGAACGTAACCGTGTGGAAAG
CTCTTCAACAAGCGAATACACTTCAAGGACAAGATCGTCAT
33165
33166
GTTTCCGTAGAACGTAATCGTGTGGAAAG
CGACATTCCCCAGCCCTTCGAGGATATCGTCGATTGAT
33232
33233
GTTTCCGTAGAACGTAATCGTGTGGAAAG
GGGCGCGTGCTCGTGCCCTCGCCTGCCAGCCGGCAACTGG
33301
33302
GTTTCCGTAGAACGTAATCGTGTGGAAAG
TCCACGCGGCCGCTAGCTTCTTCCTCTCCTCCATCCTC
33368
33369
GTTTCCGTAGAACGTAATCGTGTGGAAAG
TCTCAAGCACATCTGCTTCTAGCAAATAGTCTGGAAAGT
33436
33437
GTTTCCGTAGAACGTAATCGTGTGGAAAG
CTTCATAAAGCAGTACTGGAGCCCAGGGGCATTCTC
33501
33502
GTTTCCGTAGAACGTAATCGTGTGGAAAG
GTGTTTTTATCCATAAATCTGTCCCAAGGTCTACGTCA
33568
33569
GTTTCCGTAGAACGTAATCGTGTGGAAAG
TGGAGCTCCGGAGGGAGGGGTTCCGTGTGGAGCCCCTCCCG
33638
33639
GTTTCCGTAGAACGTAATCGTGTGGAAAG
TAACCTGGGCAAGCTTTGTGCTGTCGTTCATACACACC
33705
33706
GTTTCCGTAGAACGTAATCGTGTGGAAAG
AGTTCCTCCCGACCTTGCAGAGGGAAAAGGGATTCTAT
33772
33773
GTTTCCGTAGAACGTAATCGTGTGGAAAG
CCTCCCGGTGAGTTCTACACTGTACCTTAGGGAGATGATTTC
33843
33844
GTTTCCGTAGAACGTAATCGTGTGGAAAG
ATTTCAACGCCCGCATTTGTACCTGGCGAACCTTGAC
33909
33910
GTTTCCGTAGAACGTAATCGTGTGGAAAG
TTGCATAACGAAGAATCCTCTCGACTTCGTCTGGGAGAGCATAT
33982
33983
GTTTCCGTAGAACGTAATCGTGTGGAAAC
TGATAGAGCTCTTTTAGTTGCCTCTGGATCTCTCTGAA
34049
34050
GTTTCCGTAGAACGTAGTCGTGTGGAAAG
34078
Left flanking sequence : Till position 32424 (length
bp)
AGATTTATAAATGAAGTGCAGTGCTACCGGTTCCAAGAAAAAACTTTAAATACCAGCTCCGAGATATCAT
TACTTGAAGAACAAAGGGAATACGCCAAGG
Right flanking sequence : From position 34078 (length
bp)
GAACTTAATGCGCCATTAGCTTTAGAGTTTCCGCTGAGGGAGATTGTGTGCGGCTTTGTGTTTTTGGAAC
GGGATTTTGTGGGGTTCGAAAAGCCAGGAC
Print the CRISPR sequence : From position
bp To position
bp