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CRISPRs details
NC_015681_4
Flanking alignement tool
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NC_015681_4                                                                                                                 
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Strain :
Thermodesulfatator indicus DSM 15286
RefSeq :
NC_015681 (chromosome circular)
CRISPR id :
NC_015681_4
DR consensus (37 bp) :
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
Number of repetitions :
23
Begin Position :
918034
End Position :
919769
918034
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
TGGTTAGGTAGTCGTGTTCATACACGACTACCCGGTAGTTAGG
918113
918114
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
AAATAATGTTCATAAAAACAAGATTCACAACATGGTTCAT
918190
918191
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
TGTGTTTTTTGGCCCACAAAACGGCTTTAGCATCTAAAT
918266
918267
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
TCTGAAGCCAACTGGCTCGACAATATAATATACATTTAT
918342
918343
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
ATTAACACACTCTTCACAAACTACACCAAAACCTTCAACA
918419
918420
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
TTTATTGTTACTTTTTCATTTTTATTTATTGGTAACCA
918494
918495
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
ATGAATTTTTTATCAATTACATCTGAAAAATCAACTA
918568
918569
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
TCAACATCAGCTAAGAAACATCTGACAACAACCTCTTCAC
918645
918646
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
AGGTAATAGAGCTCGTGGTCAACCTTTCGTTCTAAGTAGTCCT
918725
918726
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
TCGAGGCTGTTTATTTTCGAATTGTCAAGCCACCTTTCCT
918802
918803
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
CCTGGGTATTGAGGGCAATCCAATTGCATCCCGTAATTT
918878
918879
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
AGGTAATAGAGCTCGTGGTCAACCTTTCGTTCTAAGTAGTCCT
918958
918959
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
TCGAGGCTGTTTATTTTCGAATTGTCAAGCCACCTTTCCT
919035
919036
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
CCTGGGTATTGAGGGCAATCCAATTGCATCCCGTAATTT
919111
919112
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
CTTTGAAAATCCTCGGCCCCGTTGTGATTTTCCCTGAAGACCA
919191
919192
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
CCAGCACCTCTTCCTCATCAAGCTCATCCGTACTAGCGAACC
919270
919271
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
GCCTTGTCTATCATGTTTTCGGTGCTGCTGAAGACAACAA
919347
919348
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
ATGTTCCTCTACGATATCATGATCCACAAGAGTTAGTTT
919423
919424
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
ATTGCTTTAAGATATCATATTGTTTATTTATGAATAAA
919498
919499
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
CTTGGTTTATTTCCCATAAAAATTCAGTATCGTTATTTTTTAAC
919579
919580
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
ATGTTCCTCTACGATATCATGATCCACAAGAGTTAGTTT
919655
919656
GTGAGAAAACCTTGCCTGATTAAGAAGGCATTACGAC
GTTGGGGAGTTGTTGTCGTTTAAAATACTTTAAATACCGG
919732
919733
GTGAGAAAACCTTGCCTGATTAAGAAGGCAAAGGGAC
919769
Left flanking sequence : Till position 918034 (length
bp)
AATAGTAAAGTTTAAAAAGTGGTTTTTGGCAAATTTTCGCTGAACCTTGACCTGAGCCGTCATCTAACTC
TAGCAGATAACGCCATTTTTAAGGCCTGCA
Right flanking sequence : From position 919769 (length
bp)
AGGCCCCCTGGCCTGTCCCTTACAAATTGACGGGCCCGGTAATATGGTAGATGGCTGATGGCTAATGGAG
AGAGACTGCTTCGCTTCGCTCGCAGTGACA
Print the CRISPR sequence : From position
bp To position
bp