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CRISPRs details
NC_015846_3
Flanking alignement tool
Page manual
  
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NC_015846_3                                                                                                                 
top
Strain :
Capnocytophaga canimorsus Cc5
RefSeq :
NC_015846 (chromosome circular)
CRISPR id :
NC_015846_3
DR consensus (36 bp) :
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
Number of repetitions :
63
Begin Position :
1229090
End Position :
1233370
1229090
ATAAAAACTCACGAATAAAATGAGAGCAGTTCCAAC
CGTCCATCAATTTTATGAGAAGATTGATGA
1229155
1229156
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
ACTTCATTTTAATCTCACACTATTTACTCC
1229221
1229222
GTTGTGATTACCCTCCAAAATGAGAACAGTTCCAAC
GCTATCCCCGATGTAATCAGCATCTACAAT
1229287
1229288
GTTGTGATTACCCTCCAAATGCTTTGCATTCATGAG
TTCCTTTGAAAACAAATAAAACTTCACGAATAAAATGAGAGCAGTTCCAACTTTTGCGAATGAGTTTACCCGAGTTCAAAA
1229404
1229405
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
ATAGCACAATATGGAGAAGAAAATGGTACT
1229470
1229471
GTTGTGATTACCCTCCAAATGCTTTGCATTCATGAG
TTCCTTTGAAAACAAATAAAACTTCACGAATAAAATGAGAGCAGTTCCAACTTTTGCGAATGAGTTTACCCGAGTTCAAAA
1229587
1229588
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TTCCTTTAAAATCTCCTTTTTGGGATACTT
1229653
1229654
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
AAGCGGTAAAAAACAAAATTTTGCAATTAT
1229719
1229720
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TATGCAGGATTCCGACCGTATTCGGTTTAT
1229785
1229786
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TGATAGCCATTTTAGCCGACTTGTGGAGTG
1229851
1229852
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TTTGGTAAAAAACATCAATGCGGGAGTACT
1229917
1229918
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TTTCTCTCACTTGTCACCTTTCGGTCCTAC
1229983
1229984
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CGGAAAGGATTACACGTACTATATGCAAAT
1230049
1230050
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TAATACCTAGGTCTGTAGTTGAGAGTGGAA
1230115
1230116
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
ACTTGAAAAAATATTAAATTTTAAACTACC
1230181
1230182
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TACTATCATATAAATGAATTTTTTTCTACC
1230247
1230248
GTTGTGATTACCCTCCAATATGAGAGCAGTTCCAAC
AGATTATCATCTTTGTATCGTTCCTTGCAG
1230313
1230314
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
AAATTATTACTTTGAATTTAATGTTAAGGT
1230379
1230380
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TAAAACCCAATTTGGTAAAGATTTATCAGG
1230445
1230446
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TTCTTCGGAATCTCTTAATTTGGAATTAGG
1230511
1230512
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
ATTTTTTTCAAAAGAGGTTATAGCTAAAGA
1230577
1230578
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TATCGCCAATCACATCTGATGGGGATATTA
1230643
1230644
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CTGTTGGACAGAGTGGTCAATCTCAGCAATG
1230710
1230711
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
GGCATTAGTGAATGGCTTGAGCGTTACCGA
1230776
1230777
GTTGTGATTACCCTCCAAATGCTTTGCATTCATGAG
TTCCTTTGAAAAAACAATAAAAACTCACGAATAAAATGAGAGCAGTTCCAACCCAGTTAATCTTAAAACCTGCATATTTCTG
1230894
1230895
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
GCGCCAAGCATGGCCGAGTACAATGCATCC
1230960
1230961
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CTACCCTACTCGGTTCCTCGCCCCGTGTC
1231025
1231026
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CTAAGTGGTTTTTACCCCAAAATAGAGAGC
1231091
1231092
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TCAATGACATGTCCAAAAACAGTGTGCTTG
1231157
1231158
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
AAAAATGTTATTGTTACCATATTTGAATAC
1231223
1231224
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
GGGTTACAGGTGTGTATTACGACAACTGCT
1231289
1231290
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TTTCTTCAGTTGGTTTTTTTCAAGAGAACA
1231355
1231356
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CAATACCCAGCTGAACCATTTCCGCCCTTA
1231421
1231422
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CAATATGATAGGAGAAGCAGAAGAAGACGT
1231487
1231488
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TTTGAATGCCGTGATTTGGCGGTTAATGCT
1231553
1231554
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TTCAAGCACGCCTTTTTCACGATGGATACT
1231619
1231620
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
ATTAAGTCAAGTTGCATCAACTCTAATAGA
1231685
1231686
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CGTTTTTTACTTCTTGTTTTATATAATCAA
1231751
1231752
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TTATGGAAAGAATTTTAAAACAATTAGAAA
1231817
1231818
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CAGCTCGTATGTGGCAAGTTTGTATCACAA
1231883
1231884
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TTGTTTGCTTCCCGCCATAATAACTAATCG
1231949
1231950
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
ATCCGCTTCCATTATAACATAATCTCTGTC
1232015
1232016
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TACCAAAACGTCGATATTGGTCAAGTTGGA
1232081
1232082
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TTTTCTGAAGTATAAATTGCCCTTTCACA
1232146
1232147
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
TAAAGAAAAAACATTAAAGGCTGACAGAGG
1232212
1232213
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
GCTCATTATTACCTCCAAAATATTGAACTT
1232278
1232279
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CTCAATTTGAGGGGAATTGGAAAGCAATTA
1232344
1232345
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CCAATAATGCGTGGATTGGCTTCAAATTCG
1232410
1232411
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CCTGCACTGGGGCGGTGGACGGTCTCGGGT
1232476
1232477
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
ATCAGCCGCTTGTGTTTGCATCGGCTTGCC
1232542
1232543
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
ATGCACAAATTCATCAAATTGATAACAACA
1232608
1232609
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CAAGAAGTATCTGAAATAGATGTACATAAA
1232674
1232675
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
GAATGAAAGCTGATGCTCAAGTTCTGCAGT
1232740
1232741
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
ATGAAAATCGCCGCCGAAGGAGGGCGTTTA
1232806
1232807
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
ATTCAAATGAATCACAAAATTATTATCCAT
1232872
1232873
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CCTGAATTTGTTCTTATAGAAAATGTTCCC
1232938
1232939
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
AATACAAATGAAAATAGATAAACATATTAT
1233004
1233005
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CAAATAAAAATGTATAACCATTAAAATCAA
1233070
1233071
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
AATAGTTTATTTTTTATAAACAAGAATTAT
1233136
1233137
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
CAATACTTCCTATTCCTATTTTTTTTATAC
1233202
1233203
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
GTCAAAATAGTCGTAATCCGCTTGTTTTAA
1233268
1233269
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
ACTTGCAAGAATATTACGAAGAACGTTGCT
1233334
1233335
GTTGTGATTACCCTCCAAAATGAGAGCAGTTCCAAC
1233370
Left flanking sequence : Till position 1229090 (length
bp)
TAAAGACCTCCCGATAAAGTACATCGGGAGGTTTTGCGTTAAATACAATGTTGTGATTACCCTCCAAATA
CTTCGTATTCATGAGTTCTTTTGAAAAACA
Right flanking sequence : From position 1233370 (length
bp)
ATCAATGCTAAAAAATGAGTGTATAAAACTGTCTATCAAGAGTGTAATATCATATATTTTACTTTATCAG
TGCTTCTTTTTCCCTTTTAAATACCTCAGC
Print the CRISPR sequence : From position
bp To position
bp