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CRISPRs details
NC_015931_2
Flanking alignement tool
Page manual
  
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NC_015931_2                                                                                                                 
top
Strain :
Pyrolobus fumarii 1A
RefSeq :
NC_015931 (chromosome circular)
CRISPR id :
NC_015931_2
DR consensus (25 bp) :
CTTTCAATTCATTCTTTGTTGTTTC
Number of repetitions :
70
Begin Position :
425698
End Position :
430417
425698
TCTTCAATCCGTTCTTGGTTGTTTC
TTCAAAGCTCCATATTTTGTCCTCCAAGGCGAGATACTACCGCTTT
425768
425769
CTTTCAATTCATTCCTGGTTGTCTC
TCCACCCTTAGACCTACGCCAAATGCCTTACTTTCATACTAACCAA
425839
425840
CTTTCAATTCATTCTTTGTTGTTTC
GTCCTCGCGGCGCTAGTGCTACTTGTGCCTGCTCTGGCGGCTAGCAT
425911
425912
CTTTCAATTCATTCTTTGTTGTTTC
CGGCAAATGCAGCACGTTGTAGTGCCATACCTATCTGCATGGC
425979
425980
CTTTCAATTCATTCTTTGTTGTTTC
CTACAGCCAGTGGCGACGATGGACGATGTGAAGACGCTCCAC
426046
426047
CTTTCAATTCATTCTTTGTTGTTTC
TCGTATACCTGGCGGAGTGGCTCCGTGCTCATTATCGTGTCTAG
426115
426116
CTTTCAATTCATTCTTTGTTGTTTC
CCGCTACGCCGCACTCGTTGACCTTCCGCCCCATCCCAAGAGTAT
426185
426186
CTTTCAATTCATTCTTTGTTGTTTC
CCGTGCGGGCTGGGGAGGGGCGGGCGGAGACACCGAGGCACAGC
426254
426255
CTTTCAATTCATTCTTTGTTGTTTC
GAGCCGCAGCAGAGACTCCTCCTGGCCCGGCACCGGGT
426317
426318
CTTTCAATTCATTCTTTGTTGTTTC
CACTACGACGACTACCAGCCAACAAGCTTCGACAACGAC
426381
426382
CTTTCAATTCATTCTTTGTTGTTTC
CTCACAGCACGTCACCCCACTACCATGACAACCACCCTGCCA
426448
426449
CTTTCAATTCATTCTTTGTTGTTTC
ACATAGTGCCGCTTGAGCGCATTGACGACCCGGAGCGGTTC
426514
426515
CTTTCAATTCATTCTTTGTTGTTTC
CCGCCCTGCTGTACGCTATCAAACAAAATCCGAACATACTGCGC
426583
426584
CTTTCAATTCATTCTTTGTTGTTTC
GTGCGCATGCTCGTGCTAGTCACCCGCGGATTGCACTACTTC
426650
426651
CTTTCAATTCATTCTTTGTTGTTTC
TTTGGTATCGGTATTCTGCTTGGTGCAATTGCTAACGCCACCAA
426719
426720
CTTTCAATTCATTCTTTGTTGTTTC
CTTATGCCCTCTTTTGCCCACTTGCGGAATAGCTCTATCCACTGA
426789
426790
CTTTCAATTCATTCTTTGTTGTTTC
TACGAGGCGCCCGACTGGCACCCGGAGGGAGTCACGGTAACCGTG
426859
426860
CTTTCAATTCATTCTTTGTTGTTTC
TGGGCAGCCGCCAAAGCCCGTCTATGCCAGCGGCGGCTAC
426924
426925
CTTTCAATTCATTCTTTGTTGTTTC
TAGGCCTGCTAACACCCTGGCTCATACTAGGAGCAATGGCGACGGGCTACGT
427001
427002
CTTTCAATTCATTCTTTGTTGTTTC
CTGGCCCTGCAGGTCGATCACTGGGGTTATCGTGGTGTT
427065
427066
CTTTCAATTCATTCTTTGTTGTTTC
AAAAGATTGCTAAATGGCTCGAAGAGGACTTGTCTGACGAA
427131
427132
CTTTCAATTCATTCTTTGTTGTTTC
GGGTTCATAGCATGGGCGGTTGGTATAGACGCCGAGATGGCCAGG
427201
427202
CTTTCAATTCATTCTTTGTTGTTTC
TAAGGGCGAGGAGCGCGAGGTTGACATGTGGGTCGTG
427263
427264
CTTTCAATTCATTCTTTGTTGTTTC
CTCGTCGCTACCCTCGATGAGGTACGGTGGTAGCATGAGCGCTGT
427333
427334
CTTTCAATTCATTCTTTGTTGTTTC
GCTCAGGTCCTCCGGTGCGTTCTCCAGCGCGTAGTTAAC
427397
427398
CTTTCAATTCATTCTTTGTTGTTTC
GGGCGGACAGTTCTTCCACTACACGGTGTTGTCGTGGCTAACG
427465
427466
CTTTCAATTCATTCTTTGTTGTTTC
TATGCCTCGCGCCTTGGCCCAAGAACCTATATCGCGTACTCGTG
427534
427535
CTTTCAATTCATTCTTTGTTGTTTC
CCAGGATGGCCGCCGCGGCGGCAAAGATGTCCGCCTCTACCAA
427602
427603
CTTTCAATTCATTCTTTGTTGTTTC
TCGGCTCGGCTTCCGTTCCTAGAGCGGCGGTATCGCCTAGAA
427669
427670
CTTTCAATTCATTCTTTGTTGTTTC
TATGTAACGCCGCGTTTCAGTGGCATGACGATGAGATGGGTG
427736
427737
CTTTCAATTCATTCTTTGTTGTTTC
ACGAGAGCGGCGGCACGATATGCGAGTGTGAAGCCGACGATGTC
427805
427806
CTTTCAATTCATTCTTTGTTGTTTC
ACAGGGCCTCTCTACTCGACGCCAGGAAGCTGGTAAGGGTA
427871
427872
CTTTCAATTCATTCTTTGTTGTTTC
CACGTTCTCCAGCCACTTTAGGAGCCACTCTTTCTTCTCCC
427937
427938
CTTTCAATTCATTCTTTGTTGTTTC
CCATGCGGCGGCTGCCGCTTCTCCACCAGCCGTCTTCATA
428002
428003
CTTTCAATTCATTCTTTGTTGTTTC
CTCGACCTTATCGCATGGCATGCAGTGAGCATGAGGAATGTC
428069
428070
CTTTCAATTCATTCTTTGTTGTTTC
CGCATACCCTCTATACGCGGTGCGGGGATCCGGAAATGGTGG
428136
428137
CTTTCAATTCATTCTTTGTTGTTTC
CAGGCTTGGGTCGTGTCCACGCCCGAAGTCCGGTATCTTGCCAGG
428206
428207
CTTTCAATTCATTCTTTGTTGTTTC
ACGTAGCTTAGGGTCGAACATGCCAACCGCTGGCTCTGTGTG
428273
428274
CTTTCAATTCATTCTTTGTTGTTTC
GAGGCTCTGGCAGATGGCCAAGGGCAGTGCTGGCAAGAAGCGG
428341
428342
CTTTCAATTCATTCTTTGTTGTTTC
CGTCCTTCGCGGGTTTACGCGTGGGGGTGCGTGGGATGGAGGCCGC
428412
428413
CTTTCAATTCATTCTTTGTTGTTTC
ACACGCGTTTTTTCAACTTGCGCGACCTCGCACATCACGATCTGC
428482
428483
CTTTCAATTCATTCTTTGTTGTTTC
TTACGCGGTAGGCCCACGCGGAGGTGGTCGCGGGTGAAG
428546
428547
CTTTCAATTCATTCTTTGTTGTTTC
TATCGCGACAAACGTGCGCAGTGATGGACGAATATACCTC
428611
428612
CTTTCAATTCATTCTTTGTTGTTTC
ACAGTGGAGGTGAGCAAGCCATCCGACTGGTCTAGGAACAGGGCTA
428682
428683
CTTTCAATTCATTCTTTGTTGTTTC
ATGGGCTGTGTCGCGAGAACTGCTACCACGCGTGTATCATGGCATTG
428754
428755
CTTTCAATTCATTCTTTGTTGTTTC
CCGTGTGTGGCAAAAGTCGAAGGCAGAGGCGGCTACAAACCAA
428822
428823
CTTTCAATTCATTCTTTGTTGTTTC
CTTGATTCTCAGCGCCACGAACGACGCTCTAGTATCGTCAATGAC
428892
428893
CTTTCAATTCATTCTTTGTTGTTTC
AGGCTGAACAGCTAGCACGGGGGAGGACACGAGCCATGAACGA
428960
428961
CTTTCAATTCATTCTTTGTTGTTTC
GTGACGGGGTACCTAGCCACGGTTGTCACCTCCTAGATGTTCATA
429030
429031
CTTTCAATTCATTCTTTGTTGTTTC
TCGCGGTAATAGTCCCCAGCGTCCGGGTCCACTGGTATCTCGA
429098
429099
CTTTCAATTCATTCTTTGTTGTTTC
ACTGAGGCCAGGGAGGAGCGGGAGCAGAAGCCCAGCGAGGCTTG
429167
429168
CTTTCAATTCATTCTTTGTTGTTTC
CGCGCGACGTTATGGTCGTTCCCGCCGCGTCCGCCTCAT
429231
429232
CTTTCAATTCATTCTTTGTTGTTTC
CTCGCTTCGAGAGGATAGTGATAAGGTGCGAGCCTATGACG
429297
429298
CTTTCAATTCATTCTTTGTTGTTTC
GTTAAACTAGAAATGAAAGCGCAAGGTTGTGAAAACGGGTG
429363
429364
CTTTCAATTCATTCTTTGTTGTTTC
CCCAGAAATATCTCGAACCGGAAATATCGAGCCCCGATAGGGTCACATTC
429438
429439
CTTTCAATTCATTCTTTGTTGTTTC
CTCACCCACCCGACCAGCGACCCATCACTAGCATTGTAGAACTCC
429508
429509
CTTTCAATTCATTCTTTGTTGTTTC
GTATTTGCACCACCAGCCGCAAGGCAGTATATGCCGCTTTTTCA
429577
429578
CTTTCAATTCATTCTTTGTTGTTTC
CGCCTGGAGGTCTTCTGCGAGTGCAAGGGGTGTAGAGCCA
429642
429643
CTTTCAATTCATTCTTTGTTGTTTC
ATGATCTCAAATCGCGTCTCTTTACCGCCGCGATCCTCTCCAGG
429711
429712
CTTTCAATTCATTCTTTGTTGTTTC
CATCAACGCTGTATCGTTCTTCCGCGATACGCCAAACCACTTG
429779
429780
CTTTCAATTCATTCTTTGTTGTTTC
GGATGTTACAACCCCAATAGTACCCAGTGTTGCATGTTCT
429844
429845
CTTTCAATTCATTCTTTGTTGTTTC
CGCGAGTGGTGGTTCGTGAAGGCGCGTCGCATAACCGTG
429908
429909
CTTTCAATTCATTCTTTGTTGTTTC
CGCAGTTCCTGGCCACTGCCCGCCAGGTGCTAGAGAAGCTCGA
429976
429977
CTTTCAATTCATTCTTTGTTGTTTC
TTTGGCTTCTCTTCATCCTCTAGACAATCACCGAGAATCAAGTC
430045
430046
CTTTCAATTCATTCTTTGTTGTTTC
ATACATGTATGGGGTGGAGGTAGGTGATGCGACCAGTCATAGGCC
430115
430116
CTTTCAATTCATTCTTTGTTGTTTC
GCGCAAATGCTCGATACGTCCGCGGGAATATCCGCCTGTAGGCCTCCAG
430189
430190
CTTTCAATTCATTCTTTGTTGTTTC
AAGTCCGGAATCTCGCTGGAGATGCCGAGGCGCGGTTTCGA
430255
430256
CTTTCAATTCATTCTTTGTTGTTTC
ACGGCCGCTGGCATATCCTCGCTCAGTAGCGTAGCTCCGATCAA
430324
430325
CTTTCAATTCATTCTTTGTTGTTTC
CTGAAGGTTATGCTGGTGGTGTATGATGGTGGAATGCCAGTTA
430392
430393
CTTTCAATTCATTCTTTGTTGTTTC
430417
Left flanking sequence : Till position 425698 (length
bp)
ACCCCTCCAACCCCTAGACACCAAGTGAAGCCCCGAACAGGCACAGAGACAACCCCAACCCCATACGAAC
AGTCACATCCACCCAGGGGCTCCACACCCC
Right flanking sequence : From position 430417 (length
bp)
TGCATTCTTGCCATGTAGCTATAGGCCCTTCCCAGTATTTATTCTTGTCTGTCTTGTCTCTGTTTATGTG
CATTTCGAGAGATAGTGTGCGCCATGGCTG
Print the CRISPR sequence : From position
bp To position
bp