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CRISPRs details
NC_015931_4
Flanking alignement tool
Page manual
  
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NC_015931_4                                                                                                                 
top
Strain :
Pyrolobus fumarii 1A
RefSeq :
NC_015931 (chromosome circular)
CRISPR id :
NC_015931_4
DR consensus (25 bp) :
CTTTCAATTCATTCTTGGTTGTTTC
Number of repetitions :
80
Begin Position :
461092
End Position :
466549
461092
CTTTCAATTCATTCTTGGTTGTTTC
GCAATACTACGTGGTGAAGAGGTGCCGCCAGAGTCAGGCATTGAC
461161
461162
CTTTCAATTCATTCTTGGTTGTTTC
GAGAGCATGACGTGTGTGTCACAACCGGCAAGAAGGGCGTGTGTAT
461232
461233
CTTTCAATTCATTCTTGGTTGTTTC
CAGCGCCTGCTCCTAGGCCGTGACCGTGACGAGGAGACGGTCTATGTCACC
461308
461309
CTTTCAATTCATTCTTGGTTGTTTC
GGGTGTGGTAGCCGAACGATAGCCTGGCTAGTGATAGTGTGTA
461376
461377
CTTTCAATTCATTCTTGGTTGTTTC
CCAAACTTGCCACCAATGCCTCAGCCAACACCAAAACCGTAAG
461444
461445
CTTTCAATTCATTCTTGGTTGTTTC
TCCCCGCGATTGTCGATACGCCGGGTGTCGTTACCGTTGG
461509
461510
CTTTCAATTCATTCTTGGTTGTTTC
CTGTGTCCGCGCCCGGGGACACCCCTCCCTCAGCATGTGCTC
461576
461577
CTTTCAATTCATTCTTGGTTGTTTC
CCCTTGTAGCGAGCCACGGCCAACACACCAACCCGATGCTAGTT
461645
461646
CTTTCAATTCATTCTTGGTTGTTTC
ACCGCTCTACGCCACCCCCTACCTGAACGTCACGACCGG
461709
461710
CTTTCAATTCATTCTTGGTTGTTTC
ACAAAACGCGCGATATATAGACGCGCGCGGCTATAATATAATATAACGCGA
461785
461786
CTTTCAATTCATTCTTGGTTGTTTC
CTCGATAGCTCTACGAATCGCCTCTGAGCGATTTATTCCACG
461852
461853
CTTTCAATTCATTCTTGGTTGTTTC
ACGGATACGTCTCGCACAGACGTACCTCTATCGTCACTTTATCTTTT
461924
461925
CTTTCAATTCATTCTTGGTTGTTTC
GAAACCCTCTTGACGGGAATGTGGCAGGGCAAGTGGAA
461987
461988
CTTTCAATTCATTCTTGGTTGTTTC
CTACCAACGTGCTGGTGGCCGCAGCCAGCCTAGCCCCGGACATC
462056
462057
CTTTCAATTCATTCTTGGTTGTTTC
GGCGCTGCTGGAAGCCGTGGTGGAGTCTATACCGGTGCTGGAC
462124
462125
CTTTCAATTCATTCTTGGTTGTTTC
TACCCGACTGCCAGGGGAGTACACGTTTACGCCACTAGCGAGTCACCATGGGT
462202
462203
CTTTCAATTCATTCTTGGTTGTTTC
GCTGCTGCAGCCTTTATTGCACAGAACGGCTCGTAGCTTAC
462268
462269
CTTTCAATTCATTCTTGGTTGTTTC
CTCGAGAGCCTCTATGAGAGCGTTAGAGGCACTAGCAAGCTCACAGTG
462341
462342
CTTTCAATTCATTCTTGGTTGTTTC
TCCAATTGCCAGGATCCTCGAGAAGGAGTTAGGTGAAGTAGCCA
462410
462411
CTTTCAATTCATTCTTGGTTGTTTC
CTAGGAGTTGAAGGGTTCGAAGGCTGAGGCTGGGATGATA
462475
462476
CTTTCAATTCATTCTTGGTTGTTTC
CTCGTAGGCGAGGTGTACCGCTGGCGTGCCCATCGCCATTGCCTC
462545
462546
CTTTCAATTCATTCTTGGTTGTTTC
GTAGGGGGTTGCGGGTACGCTGCATGGTTGACGAGCCGCTGGG
462613
462614
CTTTCAATTCATTCTTGGTTGTTTC
CCGAGCCCGAAGGAGCTTGGCGCGCGCGTCTTCAAGGGCGA
462679
462680
CTTTCAATTCATTCTTGGTTGTTTC
CGATGGCAACGAGGTTGACGTGCACTTCGACCACCTGGCGCA
462746
462747
CTTTCAATTCATTCTTGGTTGTTTC
GCGTTGGAGAGGCTGCTGGAGGAGCGGAGGGTTGACGCGAG
462812
462813
CTTTCAATTCATTCTTGGTTGTTTC
GCGTAGACCTTCAGCAGCGCCCCCCTGCTGGCCGCCTTGCCCAG
462881
462882
CTTTCAATTCATTCTTGGTTGTTTC
CAGTAGCATGCCGCTATACTACGAAGTGTTCGTGAAGTGC
462946
462947
CTTTCAATTCATTCTTGGTTGTTTC
ACGCAGTGTAACCCGGGAGAGTACGCGTTCAACGTGTCAGGTCAG
463016
463017
CTTTCAATTCATTCTTGGTTGTTTC
ATCATGGACTTCTTCAACCGCGTGAGCGTCGTTGAGCATA
463081
463082
CTTTCAATTCATTCTTGGTTGTTTC
CGGGGTACGTGGTCACAACCGCATCACCGTGTGTGCAGCGAAC
463149
463150
CTTTCAATTCATTCTTGGTTGTTTC
AAACCAGCGCCGTGCCTCGGAAACGGTGATTATGTAGAAATAGC
463218
463219
CTTTCAATTCATTCTTGGTTGTTTC
CTACGAATAGCATAGGCGGGCACCGTATCTACCTACCCGAGTATGG
463289
463290
CTTTCAATTCATTCTTGGTTGTTTC
GCAACCCGGCCTAGCTGTAGCCATGCTTGTATGCTTCGCCATATAC
463360
463361
CTTTCAATTCATTCTTGGTTGTTTC
AATAGCTCCACTACTTGGTCAACGGCGTACCCCATCCACTT
463426
463427
CTTTCAATTCATTCTTGGTTGTTTC
AGGCGAAGCCCGACGAGGTTGCCGCCGAGATATCTGGTATCC
463493
463494
CTTTCAATTCATTCTTGGTTGTTTC
TAGGATAGAGACGGTGAAGGGCAACGGGGCGTTCTTCGAGACTAGTG
463565
463566
CTTTCAATTCATTCTTGGTTGTTTC
TGATTCTCCCACCCGGCTGAGCGGTGATGACGGCAGCCTCCACT
463634
463635
CTTTCAATTCATTCTTGGTTGTTTC
AGGGCAGTAGGATTAGCGCCAGGAGTGGCGCGAGGGTTATCAAAAA
463705
463706
CTTTCAATTCATTCTTGGTTGTTTC
TACCGACGAGCAGACGGCTACGCCGCGCACCCAGCGAGAGGCTATCGA
463778
463779
CTTTCAATTCATTCTTGGTTGTTTC
TCCGCGCGCGAGATCCATCTCTCCCGCCCCCGCGCTTCGGGTAG
463847
463848
CTTTCAATTCATTCTTGGTTGTTTC
TCGCTCGAGGAGGTGAGGAGGCTGGCCCAGGAGGGTAG
463910
463911
CTTTCAATTCATTCTTGGTTGTTTC
GTCGCGTAGTATACGCGCCGCGGTGAGCACCCCGAGCTGCTC
463977
463978
CTTTCAATTCATTCTTGGTTGTTTC
CTGGCCGTGGCCCCTCTCGCAATCGGCCTCAGCTTCCTCC
464042
464043
CTTTCAATTCATTCTTGGTTGTTTC
GGAGAAGATGGCGGTCTCAGGGCCGCCGCCCGCGAGGCGGTCCCA
464112
464113
CTTTCAATTCATTCTTGGTTGTTTC
ATAGGGGGTCGTCTGGCAACACGACCTTCGAGATAACGTTCAACGTGACGAG
464189
464190
CTTTCAATTCATTCTTGGTTGTTTC
CATCGAGGCTCTGGACTACCTCGCCGAGATGATAGACTATAGGG
464258
464259
CTTTCAATTCATTCTTGGTTGTTTC
GCCAGGCCCGAGGCGGTGAGGTTTGACAACGTGGAGAGGAACGGA
464328
464329
CTTTCAATTCATTCTTGGTTGTTTC
ACCTTGGCGTCCGGCAGTGGCGGGGCCGACGGCCCCACCAGGCCCCGC
464401
464402
CTTTCAATTCATTCTTGGTTGTTTC
GGATTGTTCTAGCATCTGCTCCGAACCCAAATCATAATTCG
464467
464468
CTTTCAATTCATTCTTGGTTGTTTC
CGTGGCATAGTGATAGTGGCAACGCATACTGACATATTCCACGTCGGTC
464541
464542
CTTTCAATTCATTCTTGGTTGTTTC
TACGGCAGGAGCGCCGAGCAGGTTGAGCTCGCGAGCCTA
464605
464606
CTTTCAATTCATTCTTGGTTGTTTC
TCTAGCTCTACGCTCACGTTGAGGGGCACGGCTCTCACCCC
464671
464672
CTTTCAATTCATTCTTGGTTGTTTC
CATGGGCGCGGTTGAGACCTTCGAGGACAGGATAGCCTCGA
464737
464738
CTTTCAATTCATTCTTGGTTGTTTC
TCTATGGTGGATGGCGAGGACGGCGACATCTGGTACGAG
464801
464802
CTTTCAATTCATTCTTGGTTGTTTC
CCGTGTCCTGGTCACCAACCAGCTCCTAGCCCCGGGCGTGCGCGTGCAGCTCTTCGTA
464884
464885
CTTTCAATTCATTCTTGGTTGTTTC
ACGAGGTGAGAGACTTCACAGAGATAGCCCGCATAGTAGCAAAAACGC
464957
464958
CTTTCAATTCATTCTTGGTTGTTTC
TGGAACCGCCGCCACCGTTGGCCTGACGCTATTCGTGATTG
465023
465024
CTTTCAATTCATTCTTGGTTGTTTC
TCCGGATCCCCGCACCGCGTATAGAGGGTATGCGCGGGGGTATAA
465093
465094
CTTTCAATTCATTCTTGGTTGTTTC
ACATGGAGGAGCCAAGGCTCATAACCGCGATACGCGAGAATG
465160
465161
CTTTCAATTCATTCTTGGTTGTTTC
CAGAAGTCTTACGACGGATACTAGTGGTGCAAATAATG
465223
465224
CTTTCAATTCATTCTTGGTTGTTTC
ACTACACGACCCTGCAAATTCCCATCGTGTCATAGTGTCATA
465290
465291
CTTTCAATTCATTCTTGGTTGTTTC
GCGGTCTGGAGCCCGGTGCACGGATCTACATCTACGATGT
465355
465356
CTTTCAATTCATTCTTGGTTGTTTC
CTGGCCGCCGCACTTGGCGTTGAGGGTGTGGAGGCAAGCG
465420
465421
CTTTCAATTCATTCTTGGTTGTTTC
ACGAGGCAGTGTGTTAGTGACGATAGGCCGGTGTGTAGCGAGA
465488
465489
CTTTCAATTCATTCTTGGTTGTTTC
TTAACAGCGTACTTCAGCGCTTCGCGGACGCCAACGCGTAC
465554
465555
CTTTCAATTCATTCTTGGTTGTTTC
CGCGTTGGTCTTGTAGCTCTCTGCGCCGGCGTCCACGCGGGAGTCG
465625
465626
CTTTCAATTCATTCTTGGTTGTTTC
CCCGCATGGGTCTACCCCTCTCCCGAGATGCGCAAGGTAGCGACC
465695
465696
CTTTCAATTCATTCTTGGTTGTTTC
GTAGCTCTCGATCCACCCGCGGAACACAGGGTCGGCATG
465759
465760
CTTTCAATTCATTCTTGGTTGTTTC
CAGCCTCACTAGAATCTCGTATATCTCGCGGGCTTGTTGTAT
465826
465827
CTTTCAATTCATTCTTGGTTGTTTC
GCTCGGTGTTCAAGTCGGTGGTCTACGACCGTTGCGGGTGCGTCCAGA
465899
465900
CTTTCAATTCATTCTTGGTTGTTTC
AGTGATATGCTAGTCGGTGATTTATGGTGATAATAAACGTGCTA
465968
465969
CTTTCAATTCATTCTTGGTTGTTTC
GTACTGAAAAGTGTTGGTCTACTTGATAAGCTAAGAATGTAT
466035
466036
CTTTCAATTCATTCTTGGTTGTTTC
AATACAAAACAATCAAGATATTGACGGGCCTGCCTTTAGTAAATGTAA
466108
466109
CTTTCAATTCATTCTTGGTTGTTTC
TTGTAATGCGGGGTGAGGGCATGAAACTGAGAGAATTAGTA
466174
466175
CTTTCAATTCATTCTTGGTTGTTTC
GACGTCGTAATGCAGATCATGACGCGGTGGTTGCTAACGCCACT
466243
466244
CTTTCAATTCATTCTTGGTTGTTTC
TGCGGATAGAGGAGGGGAGGATAACGTTTCCGATCGGGGTG
466309
466310
CTTTCAATTCATTCTTGGTTGTTTC
AAAACGATCCGTGTCGAGTCCGGCCTCGCGATAATCAAGGTA
466376
466377
CTTTCAATTCATTCTTGGTTGTTTC
AGCGTCACGTCCCAGCTTCTCCTGCCGTAGGCGGTGTACGCTGGTTGGTCTGGA
466455
466456
CTTTCAATTCATTCTTGGTTGTTTC
TCGCTAGGAAGGGCCGCGAGTGGGTGGCTGCCGTGAGTTATGGG
466524
466525
CTTTCAATTCATTCTTGGTTGTTTC
466549
Left flanking sequence : Till position 461092 (length
bp)
GGCCACCTCCTCCAGCTTCTTCACAACCTCCCGGATGAGCACAATCACCTCCTTGTAGGCCTTAATCCAG
GTCTTCGAGGGTTACTCTGCAACCGCATGC
Right flanking sequence : From position 466549 (length
bp)
TGCATTCTTGCCGTGTGGTTATAGGGTCTCTCTTCTATTTATTCTTTTCTCTGTTGTCTTTGTTTCTGTG
ATTTGAGTGTAGTCGTGCCGGGCACAGATG
Print the CRISPR sequence : From position
bp To position
bp