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CRISPRs details
NC_015949_1
Flanking alignement tool
Page manual
  
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NC_015949_1                                                                                                                 
top
Strain :
Caldicellulosiruptor lactoaceticus 6A
RefSeq :
NC_015949 (chromosome circular)
CRISPR id :
NC_015949_1
DR consensus (35 bp) :
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
Number of repetitions :
58
Begin Position :
1695607
End Position :
1699780
1695607
GTTTTAACCCCTCTTAAGTGGAGAATCTTTTCAAC
CTCCCTTCCGATTTCTGCCAGTCCCCACACATCCA
1695676
1695677
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
AGCAGGATTGGCAACCGCAGCGGTAGGCCCTCTTTTAAA
1695750
1695751
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
GTATTGCAGGCGTAACAGAAGTTAAATCATACATAT
1695821
1695822
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
ACATCATTATACGCATATACCACATTACTAGCACTT
1695892
1695893
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
CCTTCTTATCGTCTGCCTTAAGCTTTGGATAAAATC
1695963
1695964
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
AACCAAACCCGCCACAAGAGATGAATACATTAGAGCTTTC
1696038
1696039
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TTTATCTTTTCAGTTTTTATATATAATAAATTGTTTTAA
1696112
1696113
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
AAGAAAAAATGGGTACTGAACATCCAGCATTAAAAC
1696183
1696184
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
AACCAGATAACATTGTCGATTTCCCGTTTTTTCTGGC
1696255
1696256
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TCAATATCATCTGCATATAACGTATTTTGCTCTAAAT
1696327
1696328
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
CTGTTCCCTGCGATGTATATATGTCAATACCAAGTTT
1696399
1696400
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TCAATATCATCTGCATATAACGTATTTTGCTCTAAAT
1696471
1696472
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
GCAGAACAGTAACTGTATCAAGCGGCTCTATTTTGT
1696542
1696543
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
GAATAAAGGAGACAGAAAAGGCAGTACAGATAAGAAT
1696614
1696615
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TTAATTTGGCTTGAAGGAAGAAGAGTATTATTTATAC
1696686
1696687
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TTATTGTTGTTTGTACAACATTAAATGCCGCTCTTAC
1696758
1696759
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
AACGTCTTTCATATCAGCACCGTCTAAAGCACCTGGCAAAATC
1696836
1696837
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TTTATAGAGGAGTAGACACCTACTCCTCTGTAGC
1696905
1696906
CGTTTTAATCCCTTTAAGGGAAGAATCTTCCCAAC
GAGCTGCTGCTATACAGTTCTTCGCTAAACTCTGCCTT
1696978
1696979
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TACATAGATTTTAAAAACATAAGTCCCGAAGTTTTTAC
1697051
1697052
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TGTACTCGTTAGCTTTTCAATTATACTATCCTCATTCA
1697124
1697125
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
CTCATCATAAAGCACACAAGCAATATACTGAACATCC
1697196
1697197
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
CCCTACTTTGCAATACCCTTAAAAAATCTGACAGC
1697266
1697267
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
CTCATCATAAAGCACACAAGCAATATACTGAACATCC
1697338
1697339
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
AGAAAGAAGGTGGTTTAATATGGCACTAACTGCACAGC
1697411
1697412
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TAAAAGAAAAAAACGACAAATAGTAGAAGTTTGTTAT
1697483
1697484
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
AATCGTCAAAACTTCACCGTGATAAAGTGATGAAC
1697553
1697554
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TAGTTATTGTTGCCTGCACAACACTAAATGCAGCTTTAAC
1697628
1697629
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TTCCCCATAGCTGGTCTTGCAGCAATAATGTATAAGC
1697700
1697701
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
ATCATAACAGGTTTAAGACTATGTTTTGCAATAACTTCCTTGATGTA
1697782
1697783
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
CTTCTTGGGTTGGTGGACTTGTATGTATACTGTTATGA
1697855
1697856
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
GGCAGTAGCACAGGCGGTTAAGAGTGCGATTGCAAC
1697926
1697927
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
GCCAAGGACAGAATTTATTTACCAACCGATTTATG
1697996
1697997
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
GTATTTTAGAAATGTATCAACACAAAAAAGCCAAGCTT
1698069
1698070
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TTCAAAGAAAAACAAGCGAGCAACAAGTTGTATCAATT
1698142
1698143
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
ACCGCCCAGCAAAACGTTCATCGCTCTTATCTTTTCC
1698214
1698215
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
GGAAAGAGTGGTTTACAGTGTCCAATCAAACGCTTC
1698285
1698286
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
CGAACAATGTCCTTGTAAATACAGCTACCAGATTAAAA
1698358
1698359
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TTGAGGTAAGAGGAGCTTCGGCTCTAACCGCAACATATGG
1698433
1698434
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TGATATGCTTTTAAAAGCTGAAAGGCAATGTTAAGTT
1698505
1698506
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
AAAAACTAAAACCAATTAACCACAAGATTTTGGCTATTAC
1698580
1698581
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
CTGAACAATCACTCAAATAACACTTTATTTTTCCTTTC
1698653
1698654
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
GATTTTAATCACTATTTTAGGCACTTCGGCATAGCGTT
1698726
1698727
GTTTTAATCCCTCTTTAGGGAAGAATCTTCCCAAC
TCCGCCAGAGCCACTTGTTATTGGCTTCAATGTTCGA
1698798
1698799
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
AATTACAGAACGGCATATTGGAACAGGAATTAAAGC
1698869
1698870
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TTGGTTTAAACTTCTTAGAAAGTCTGGATTATAGT
1698939
1698940
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TATGAAATAATACACCCTCGCAAGCCAAAACGAAAGAT
1699012
1699013
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
CTTCAAAACGAGAAGGAAGAATATTAGAAGGATTTGACC
1699086
1699087
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
GTTGCAAGAAAAGTTACTGTTAGAACGTTTGTAGCTTATA
1699161
1699162
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TACACCTTCAAGAATTGTCTCTTCTTTTGACATTTTAT
1699234
1699235
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
CTGCCACGGGAGTTTAGGATACTCTAACCCTTCATTAAT
1699308
1699309
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
CTTATCCCTTCCCATGCACCTTTCCAATCACCTTTAATAAT
1699384
1699385
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
AACTGCCAAGCGGAATTGGTATTATTGAGCTGGTAGA
1699456
1699457
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
CTTCAAAACGAGAAGGAAGAATATTAGAAGGATTTGACC
1699530
1699531
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
AGCTCTTTTATTAAATTTGTCCATGCTTGATAATATTT
1699603
1699604
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
AAGCTGATTTTCACTACAACGTTACCAACCTTGACG
1699674
1699675
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
TGCAAAACTTTTATCTTTGCTATATCTGATTGTTCT
1699745
1699746
GTTTTAATCCCTCTTAAGGGAAGAATCTTCCCAAC
1699780
Left flanking sequence : Till position 1695607 (length
bp)
TTTAAAACTGAAGCTCAGTAAAAGGAAAATTTCAAAAATCCAGCTTACTATCTTTGCATGATGTCTTCGC
AGCAAGGTGTATGTCTCCTTCTTCACAAAG
Right flanking sequence : From position 1699780 (length
bp)
AGCGCCGATTGTGAGGCTTGAAAAACCTTGATTTCTAGTTCAGTCTGCGATTTGAAAATATAAAAGTTTC
CTTCTCGCAAAAAATTTTTAAGCATAATAG
Print the CRISPR sequence : From position
bp To position
bp