Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_015979_1                                                                                                                 top


Strain : Lactobacillus sanfranciscensis TMW 1.1304 RefSeq :NC_015979 (plasmid pLS1 circula)
CRISPR id : NC_015979_1
DR consensus (29 bp) : GTATTCCCCACGCATGTGGGGGTGATCCTNumber of repetitions :15
Begin Position : 28011 End Position : 28902

28011GTATTCTCCACGCATGTGGGGGTGATCCCACGGCACACTCGTATTCTGGATAGGCTTTTTTG 28072
28073GTATTCCCCACGCATGTGGGGGTGATCCTGGAATTGACGGCTACCATGCTTCTGCCGACATG 28134
28135GTATTCCCCACGCATGTGGGGGTGATCCCGTCCCACGCAAGTCAGTCGCAAATTGTACACG 28195
28196GTATTCCCCACGCATGTGGGGGTGATCCTCAAGTCTTGCGAATCATTCAATCCTTCGCCTTG 28257
28258GTATTCCCCACGTATGTGGGGGTGATCCTTTCTTCATGTTTCTGCTCGGCTGTGGCTCTAA 28318
28319GTATTCCCCACACATGTGGGGGTGATCCTATCATGGCGATGAATTTGAAACTCAAAAATTA 28379
28380GTATTCCCCACGCATGTGGGGGTGATCCTATCTTTTTTTCGTGTTCAAAAAATTCCTTTCC 28440
28441GTATTCCCCACGCATGTGGGGGTGATCCTTAACAGTTCTCATGGTATTTTGAGATATACATA 28502
28503GTATTCCCCACGCATGTGGGGGTGATCCTACTACTTGAAATGACGTACCTACAAAACCGATG 28564
28565GTATTCCCCACGCATGTGGGGGTGATCCTAAAATTGAAAAACTTGAAGAAGCACTTGTTAGA 28626
28627GTATTCCCCACGCATGTGGGGGTGATCCTACTCATAAAACAAGCCTACAAGTTGAATTTGA 28687
28688GTATTCCCCACGCATGTGGGGGTGATCCTATAAATGTAATGAAAAGTGAGAGGGGGCTTAAA 28749
28750GTATTCCCCACGCATGTGGGGGTGATCCTAAATTTTTCAGTTCACGCTTTTGGCTTTCATCA 28811
28812GTATTCCCCACGCATGTGGGGGTGATCCTAGCAAGTACAGCATTATCTTATATCGTTGGTTA 28873
28874GTATTCCCCACGCATGTGGGGGTGGATGT28902
Left flanking sequence : Till position 28011 (length bp)
TGTAGCCACGTATAGTGTGGGAGCAATAAAGTTGCGTTATGACCACTGACCGCAAGGTCGTGAGTTACAA
GCCTCTCACTTTAGTGAGGGGTAGTTGACT
Right flanking sequence : From position 28902 (length bp)
AAGCTGATTCCTGAGACAACTTTTAAGAGAGCGTATAATGAATAAATCGTCTCTCAAAAGGAAGGAATTT
TTACATGCCAACTCGTTACGACAAAGAATT

Print the CRISPR sequence : From position bp To position bp