Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_016025_2                                                                                                                 top


Strain : Candidatus Chloracidobacterium thermophilum B RefSeq :NC_016025 (chromosome circular)
CRISPR id : NC_016025_2
DR consensus (36 bp) : GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACNumber of repetitions :101
Begin Position : 420934 End Position : 428142

420934GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTGAAAAAGACGAACACTCCGGAGGACGGGAAGCCT 421004
421005GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACAAAGTAAAAGCTTACGTTCCAACCCTGGAGTACACGCGG 421079
421080GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTGAAAGGTTTTGTGCCGGGGTGTGCCCGTTTTCCGGCGG 421154
421155GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCTTCTGCGCCGGGATTGAGCACGCCGTCCACATCACT 421227
421228GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCTCCCGCCATTCACTTCCACTTGCACCGATTGCCGCCA 421301
421302GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGACTGCACAACCGACAACGCAAACTGCTTGAACG 421371
421372GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCGGCGTCAGGACGACTTCACGCTGGGCGTGCGCGA 421442
421443GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCTCTCAGCGCCCACCATCGTTGATTACACCCGCA 421512
421513GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCGATAATGACGGCGATCAGCGGGAACGGCATCAGAT 421585
421586GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTCGTAGTGATTGCCGGCCATCTCGTAGACGGCTTTCA 421658
421659GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTGTGGCTATAGTACACGTGCGCATTGAGCTTGACA 421729
421730GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTCCATTACGTTTATCGCGTGCCGCAATCCCGTCAAGCC 421803
421804GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACAACCACGCTTCGCCGCGCATATCGGTAAGCGTCGGCGC 421877
421878GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACAGCTTGCGGCGTTGCGTTACTCGTACCAGCGGGG 421947
421948GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCAATCAGCGGGAAAGGCATCAGATTATCCCCCCC 422018
422019GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCAGGGGTTGCCCTTGTGTTGCACAAACCAGTCGT 422088
422089GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCAGGCTTACCGCCGCCCAACTCTGTCAAGTGCTTGAAC 422163
422164GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCCTTGCCGTCTCCCCTTTATTCCTGCCTTGCCAGG 422234
422235GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTTCGGCGCACGCTGAAGGTCTGTCCCCCAGACGA 422304
422305GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCGGTTTTTGTGAATTCGACGGTTGGCGGCTGAAAG 422375
422376GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCCAAGCCGGCGCAGGGAAAACGTCGCTCATCCCG 422446
422447GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTTAGGAAACCGCACCAAGACGCGAACAAGCCCGGC 422517
422518GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACACAATGGCGATCAAGGGAAACGGCATTAGATTACCCCT 422591
422592GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACACCACGTCGCCGGGCCACGTGATACCAAATAAGCA 422662
422663GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTACGCGCGGCGTTGCGCGTCATTCAAATGCGACAGA 422734
422735GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACACGGCCTTGATTTCGTCTTCGATATTCCGGCGTCGA 422806
422807GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACATACCGCTCCGCCGGAATTGTGGTTGGAGCTGGACGGCA 422881
422882GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCAGACGAGTGGCAGATACAGCTACCGTCTGCCCTTT 422953
422954GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTCAATCAGGAAAAACCAGCCACGCACCGTCGCGGC 423024
423025GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTACCAGCCGGACTTGTCACGCTTTTCGCCCGTATTGT 423097
423098GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCGCTTGTTACGCCGTATTGGGCAAGGAATCGAG 423167
423168GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTTTGGGAAGCGGGTGGTGGGATTACCCGTCATTCTG 423239
423240GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGTTCGCTCTTATTACTTCAGCGGCAAGTACTACG 423309
423310GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTCCACGATGGGCCGGTAGTCCAGTCGCGCGCACTCTTG 423383
423384GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACACCATGTACACAAAGTACACACCGGATAACCTAACCCA 423457
423458GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGTGGTATTGCCGCCTGCTGCACGACTGGGCATGG 423527
423528GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCCCTTTTTGTGGCGCCTTGAAGCCGATCTTGTTCTTT 423600
423601GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCAAATCTGGACGCAACTTTGATTGGCGCTGCGCCGG 423673
423674GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACAAGCGGCACGGGAGAAACCAGGAACTCGCCAGTAT 423744
423745GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTGGTGCTCCGCCTGACGCGGTATCTCACGGCTGTC 423815
423816GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACAACGTTTTGTCAAGGGGAAAGTTCCGATTTTTTT 423885
423886GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCCGGCAATCACTACGACATCTGGGTTGGGTACGT 423956
423957GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCTGGCTGGCGTGGGCTGTGCAAGGGGAACTTTTG 424027
424028GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTCCACGATTGGTCGGTAGTTCACTCGCATGCACTC 424098
424099GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTTGTCGACCGCCGGGAAAGCAGCCGGCGGAGTGTCG 424170
424171GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGTGGCAGGCGCGGTTTCTGAAGGCCCTACCCGCTAT 424242
424243GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGTGTGGGTTTGAGATTCGCAACCGGGCCTTCAAAG 424313
424314GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCGCACCTGAGGAAGTGGATAGAACGACTGTCGAAAGA 424386
424387GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGACTCGTTACTTGACGAGTCCACGCCAGATTAAG 424456
424457GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCGCTGAACTACGTTTTGGCTAAGGTCAATCAACTGGG 424529
424530GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACAAAAACTCAAGCTCTTGCGCAAGCGCATGGGCGGCA 424601
424602GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGATTTCGCCTATGCGAAGACGCTTGCGCGGAGATA 424672
424673GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACAAGAAGCCCAAGCGCAGGCGCGGATTATTGACCTGACCA 424747
424748GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCGGTAATCGTGATTATAACGCCTGAAGCGCGGGG 424818
424819GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCGGACAAGTGGCAGATACAGCTACCGTCCGCCTTT 424889
424890GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACACCGCGCCGGTTTTTCCGTTTGAGCCAAACTGGG 424959
424960GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCCCGTCGCTGGTCAAGGAGCGGGTCAAGGGGCGTCC 425031
425032GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACACGGCGTGCACTGGGTACTTTGCTTTCCCGTCGAA 425102
425103GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACACCGGGTCTGACCCATATATTGCATCACGAGTGC 425172
425173GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTGTTCTCAACCGAAATCACCGTATCCGACGGGTTG 425243
425244GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACACGGTTGGCTTCAACATGGCGTTTCAATCCTGGGTG 425315
425316GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGACGCGGTGATTCGTGAGGCAATCAAAGACAGGATT 425387
425388GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCACGCTGCCGTTGCTGCTGGCGGGCTGGACAAGCTG 425459
425460GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGGCCGCTATCTGCACCTGCAGGGGAAGGTGTATTACGC 425533
425534GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCGGTGTGCTATGCAGTGTGGGGCTGGCGTCCACG 425603
425604GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTACGGGAGACGGCGCAGAAGCTCCCCTAAAGCGT 425673
425674GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTCACACGCTTCTACGCGAATTCACAGACCGGGAATGG 425746
425747GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACACCGGCGAGAGACCGTTTCTATCCTGCCTTGGGATA 425818
425819GTGCAAAAATCTTTGATGCCGAAAGGCATTGATCACATTTCAGCCGAGCGACCGCCGCTTGGATTTGTTCACGA 425892
425893GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCCATCGCAGTCAAGAGCACTCGCTCGCTCTCGCAACA 425966
425967GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTTATCACAGCGCGCCTCGACCGCAAAGTTGACGCAAAG 426040
426041GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCTGTCACACGTGCTGGGAGTACACACCAGAGGGG 426110
426111GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTGGTTTCTCCTTTCCCGCATAAAACGGCTTCGAGTG 426182
426183GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCGATTGCGTCAGCGTCACGCACCTTGTCTTTGACAG 426254
426255GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCGAACTCGTCTTGGTGCGTGTCGTTATCCGGGAGACA 426328
426329GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTTGACCGGAGACTGCTGCGAACCAACCTTGTTGGCG 426400
426401GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACATCTCTGGGTCGGATACGTCCGACCCAACACAGCCG 426472
426473GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCAGTTGCACCGCCGCCGAGAAAACTTGCGGCTT 426542
426543GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCACACCATAGTACTGCTTCCACGCAAGAGCGCGTCGG 426615
426616GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACAGCAGGCTGTAGTGTTTTCCATCCAGTCTTGCGACTG 426688
426689GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACATCGCCCCTAAGTCTGGCGGCTCCCAAGTGTCCA 426758
426759GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTAGACTTTTGCGAGTTTCAGCGACATAAGGCGGGTCA 426831
426832GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACAATCGCTGCTCGCACGGGTGCTTTTACTGTTTCGC 426902
426903GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCTTCAGTTAGAGGCCCTTCAAGACTTGCTCAATCAG 426974
426975GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGGCCGCATCCTGTACTCGCCGTCAATGCCGGGCC 427044
427045GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGACGGCGGCCAAGATCAGTCCGAAACACGCCGTCGG 427116
427117GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCCCATGAGGTTTCGTTTCTTTTTTCGATCTGCGA 427187
427188GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCTCCCTTTTTTTCTGCTTGTAGAGAAGGCGCCTA 427257
427258GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTCAACGAAACCCGTAAAACCCTGAACGCCTACGCA 427328
427329GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACAGACGGGACTGACTACGGCTTACCCAGCCTGGTT 427398
427399GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCTTGCCAAACTTCTACCGCTACTTCCAGCGCATAAG 427470
427471GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCCAGCCGGTAAGAATCAAGCTGGTCTAGTTCTAAC 427542
427543GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTCCGACAAGCCAATTGGCGCGGTCAAACGCAGGTCA 427614
427615GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACGCCGGGCGGGGGCTACGCCCGAAATCTCACACCG 427684
427685GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACATACCAAGTATAATAGACTTCTGTGCGAAGTTGTA 427755
427756GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTGCTGACGGTTGTGGACGACAGCGAGGATGATTCG 427826
427827GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCACCCGTCACGCGGGTGCGAGTGCCGGAAGGCACTG 427898
427899GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTTTGATTCGGTCTCAATCGAGCACGAACGCGCGTTT 427970
427971GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACCGGCCGAAATACCGGCCATATTTCCGCGCTGGCTT 428041
428042GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCACTTAAAACCGGCGAATGGCGAATGGTAGAT 428106
428107GTATGAAACTCTCTGATGCTGAGAAATGTTGATCAC428142
Left flanking sequence : Till position 420934 (length bp)
GCATTACCCGGCAGACGGGAGGCGGCTTGCCGCCTTTCCGGTTCAGGTGCTTGAGCAAGAAGCAGTTTTA
TGTGGCCAGTGCTTACCGTTTGGGGGCGCG
Right flanking sequence : From position 428142 (length bp)
CCACAAGGCGTTGTCAGGCAAAAGCAATCTTGAGAGATTGCTTTTGCCTGACAACACCACATCGCCAAAC
AAATTGACCGACCAGCAGTTCCCCTCCCCT
Print the CRISPR sequence : From position bp To position bp