CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_016148_1
Flanking alignement tool
Page manual
  
Home Page
NC_016148_1                                                                                                                 
top
Strain :
Thermovirga lienii DSM 17291
RefSeq :
NC_016148 (chromosome circular)
CRISPR id :
NC_016148_1
DR consensus (30 bp) :
GATTCAATCGAACCGATACGGAATGGAAAC
Number of repetitions :
24
Begin Position :
256316
End Position :
257821
256316
GATTCAATCGAACCGATACGGAATGGAAAC
CGTCCCGTCGCTCACATTGTGGGCACATTACCA
256378
256379
GATTCAATCGAACCGATACGGAATGGAAAC
TGTTTTGGCGCCCGCCACGTTTCGCTATTT
256438
256439
GATTCAATCGAACCGATACGGAATGGAAAC
GTTACGCTCACGATAGGCAAGCTCCAGTATTT
256500
256501
GATTCAATCGAACCGATACGGAATGGAAAC
ATATTCTTTCGCCCTCAAACCTCAAAGGGCGGC
256563
256564
GATTCAATCGAACCGATACGGAATGGAAAC
AAATAAACTGAGCTTTGTTTAGAGTTTCTTT
256624
256625
GATTCAATCGAACCGATACGGAATGGAAAC
TAGCGCCGGCATGAAGAAGGGCGCCCCTCCTA
256686
256687
GATTCAATCGAACCGATACGGAATGGAAAC
TGCCTCCAACATCTCATATCACTCCTTTTTGTTAT
256751
256752
GATTCAATCGAACCGATACGGAATGGAAAC
TTTCTGTTAACTGTCTAGCCCTGACGAAGACCTCTTC
256818
256819
GATTCAATCGAACCGATACGGAATGGAAAC
GTCGCTATCGGATATATTCTTAATTTATCATACG
256882
256883
GATTCAATCGAACCGATACGGAATGGAAAC
TGTGTCAAGCTCTAATGGTAAAGTCTAAATATTC
256946
256947
GATTCAATCGAACCGATACGGAATGGAAAC
CAGTAAACGTCCCAGCCGTCCTCACGTAGCCACTTGA
257013
257014
GATTCAATCGAACCGATACGGAATGGAAAC
AACATTTGGTGCAAGGCGTCATCGATGTCGTTAAG
257078
257079
GATTCAATCGAACCGATACGGAATGGAAAC
ACCTTTCCAAATATTATATTTTATTGTCAAG
257139
257140
GATTCAATCGAACCGATACGGAATGGAAAC
TTCAGCGCTGCAAACGGAAGGATATAGGAGACA
257202
257203
GATTCAATCGAACCGATACGGAATGGAAAC
CAATATCCAACCTTTTCATCGCTTATGCGGACAG
257266
257267
GATTCAATCGAACCGATACGGAATGGAAAC
GCATCCCATCCTTTCCTTTCTTATTGTCAAGGTACGAT
257334
257335
GATTCAATCGAACCGATACGGAATGGAAAC
GTGCACTCCTCCGTACCATTTAGATAGTACGGAGCATA
257402
257403
GATTCAATCGAACCGATACGGAATGGAAAC
CTGAAAATATTTTTTCAGCGCTGAATATGGGAGAATG
257469
257470
GATTCAATCGAACCGATACGGAATGGAAAC
CCTGATTTGTTCCTGATCCAACTGTGGTAATTG
257532
257533
GATTCAATCGAACCGATACGGAATGGAAAC
TACTACACCCCATCCTTTCTTATATTTTCTTGTC
257596
257597
GATTCAATCGAACCGATACGGAATGGAAAC
TCGCGCCGATCGGGAGGCGTTGTGAAAAAGAGGAGCCC
257664
257665
GATTCAATCGAACCGATACGGAATGGAAAT
TGTTCTCTCTGTATTGATATCTCCCTTTGGCG
257726
257727
GATTCAATCGAACCGATACGGAATGGAAAC
CCTTGGACAGCCACCACCTTGCCCACATAGGCAAA
257791
257792
GATTCAATCGAACCGATACGGAATGGAAAC
257821
Left flanking sequence : Till position 256316 (length
bp)
TTGTAGTTGTGGTCTGCCTCCGCGGAGAGTGTTTCTACGCAAACATAGTTCTGTTTTTCACTTATTCTTA
AGTCTTGCAAATACTGGTATTATAATAAGG
Right flanking sequence : From position 257821 (length
bp)
ACTCCTATGCTTTGACTTATCTATGATTTTCGGTGTTTTTTCTAATAGATACCCAAAATGTTTTTCCTTT
CCAGTCTCCAAGTCCCTTAAGGCTCTTACA
Print the CRISPR sequence : From position
bp To position
bp