CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_016148_2
Flanking alignement tool
Page manual
  
Home Page
NC_016148_2                                                                                                                 
top
Strain :
Thermovirga lienii DSM 17291
RefSeq :
NC_016148 (chromosome circular)
CRISPR id :
NC_016148_2
DR consensus (30 bp) :
GTTTTAGACCTTCCTATAAGGGATGGAAAC
Number of repetitions :
46
Begin Position :
279012
End Position :
282019
279012
GTTTTAGACCTTCCTATAAGGGATGGAAAC
ACTATGGCTTTGGCTCTTTTATTATAGCCATTATCTG
279078
279079
GTTTTAGACCTTCCTATAAGGGATGGAAAC
ACTACATTGGCAATTTCTTTTGCTGACTTATTTTTA
279144
279145
GTTTTAGACCTTCCTATAAGGGATGGAAAC
GGTTTTTCAACAACTGCAGCTTGGGGCTCTAAACCAA
279211
279212
GTTTTAGACCTTCCTATAAGGGATGGAAAC
GGGGCTTTAGGCGCATCCTCCTGGCCCGTGTCACCGT
279278
279279
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TCGAACTGTTCCTCAAGCCCCCTTGTGCTGAGCCAC
279344
279345
GTTTTAGACCTTCCTATAAGGGATGGAAAC
GAGCGGTGACGGTGCCAGCTAGCGGGACCACAGCCA
279410
279411
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TATGTCAGCGCCATATGTCGAGGATATGCATTTTG
279475
279476
GTTTTAGACCTTCCTATAAGGGATGGAAAC
ACGACATAGATGCACTGCTTCAGGAGCTCTTCGATG
279541
279542
GTTTTAGACCTTCCTATAAGGGATGGAAAC
ATGAAAATGACATAACCAGATACAAATGAAGGCGG
279606
279607
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TAGACTTCATGCGCGACGACTTCAGTCGTCTGCCCC
279672
279673
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TAGCAATAAGAGAAAGGAGTGAAAAACATGACTCTA
279738
279739
GTTTTAGACCTTCCTATAAGGGATGGAAAC
ATGCCGTGCGGGCTGAGAGGTGTCGCCGTTCTTTCTA
279805
279806
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TTTGATGTGCGCTACCTGTTTTCCTCCCCAAAACAA
279871
279872
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TGATTTTGACGAGGCCATGCTTAACGTTCTTATCTT
279937
279938
GTTTTAGACCTTCCTATAAGGGATGGAAAC
CTCCAGCGTCACGACGTGGTAACCGTTGGCGCATG
280002
280003
GTTTTAGACCTTCCTATAAGGGATGGAAAC
ATTACTCCTATGGTCTAGAACAGAAGCTCGTACACA
280068
280069
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TCGACAACAACGCCTGGTACTGGAAGGGGCAGCTG
280133
280134
GTTTTAGACCTTCCTATAAGGGATGGAAAC
AAGGGGCCAAAAGTACCAGTGCTAACAACGCGAAAGC
280200
280201
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TAAATATGCCCGCCGCACCCTCACCTGCTATGGCCAC
280267
280268
GTTTTAGACCTTCCTATAAGGGATGGAAAC
ACGCATATTTTGCGGCAATAATACTGTCTGCGGATA
280333
280334
GTTTTAGACCTTCCTATAAGGGATGGAAAC
CGCAATATGACCCACAAACCGACACAGTGTCTTTTAT
280400
280401
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TTGCAACAGAATCAGAGTTTTCGCTGTGGTCACATC
280466
280467
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TTCGTAGCGGATATCAAACTGGCTGAACCCCATAAGCC
280534
280535
GTTTTAGACCTTCCTATAAGGGATGGAAAC
GTGGCGTTCGTATGGTTGGCCAAGAGCGGCAAGCTGA
280601
280602
GTTTTAGACCTTCCTATAAGGGATGGAAAC
AGTTCCCGCCTCATTTCCAGTAGCTCCCGCACCGCCT
280668
280669
GTTTTAGACCTTCCTATAAGGGATGGAAAC
CTGGCTAGACCTATAATCCTTGAGCATGACGGAAA
280733
280734
GTTTTAGACCTTCCTATAAGGGATGGAAAC
CTGCTCCATCTCCCCATCGAGACGGGTTCTTCCAT
280798
280799
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TACATCCTCCTAAGTTTTTTGGTCGGCACGTACTTA
280864
280865
GTTTTAGACCTTCCTATAAGGGATGGAAAC
ACAGTATGGTAACACCGCAAATCATAAGCATCATA
280929
280930
GTTTTAGACCTTCCTATAAGGGATGGAAAC
CGGAAAAACAACCTTAGGTAGAATAGTCGCAAAATA
280995
280996
GTTTTAGACCTTCCTATAAGAGATGGAAAT
AGTGTTTTTATGACCCGACCGATGCCGCGCAAGCA
281060
281061
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TCCAAACACACCTTCCAATCTAAATGTTCAATCTGAACC
281129
281130
GTTTTAGACCTTCCTATAAGGGATGGAAAC
CCGCTCTATGGCGTCCGGCGGCCAACCGTGTTCATT
281195
281196
GTTTTAGACCTTCCTATAAGGGATGGAAAC
ACCAGTTTCGCGTTTTTCTGCGCAATAGCCACCTC
281260
281261
GTTTTAGACCTTCCTATAAGGGATGGAAAC
GTGCCCATGCTGCAGAGTGTGCCGGGGCTACTTCAG
281326
281327
GTTTTAGACCTTCCTATAAGGGATGGAAAC
GTGCTTGAAGGAATTACGCCTGTTTACGCTTTTTCAA
281393
281394
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TTGTTATCTTTGTTACCTCTCTGCGCGTCCTCTTG
281458
281459
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TTTGTTTCCTTCGCGCAAAGGCCGTGGGCCTATAACG
281525
281526
GTTTTAGACCTTCCTATAAGGGATGGAAAC
ACAAAAAGGAAAACCCCCTTTATGATCGGGCTAGACC
281592
281593
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TGTCGGCGCTTGGGATATCGGATTGCGGCAGCCTTGC
281659
281660
GTTTTAGACCTTCCTATAAGGGATGGAAAC
ACCACCTCGCCCTCCCATGTGATTTTTTCCGGCATAG
281726
281727
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TCCAATTCAATTGCCGTGGCGAGTTCAGCCGACAAT
281792
281793
GTTTTAGACCTTCCTATAAGGGATGGAAAC
CTGAAATAGTCTTTGACTGTGCCATTAACCACGGT
281857
281858
GTTTTAGACCTTCCTATAAGGGATGGAAAC
TGTCGAGGATATGCATTTTCCGGGTAGCCCTCTGAC
281923
281924
GTTTTAGACCTTCCTATAAGGATTGGAAAC
CAAGCTGTCACAGAAGCAGTAGGTCAGTGCCTTATT
281989
281990
GTTTTAGACCTTCCTATAAGGGTTGGAAAC
282019
Left flanking sequence : Till position 279012 (length
bp)
GTAGCTACTGGTTATGGCTCAAAAATAGGACCTTGAAAATAGAATAAATCTATGGAATATTATTGTAGAG
AGAAACTAGAATACGGCTAGAAGAAAATGG
Right flanking sequence : From position 282019 (length
bp)
TGCGGCAGGTAGTTTTAAAAGTAGCTTAGAGATGTAAAATTTCTATTCATAAGATACGCTGACAGATCAT
GGGCTCTACAAAGTGCAATAAATAAGTATT
Print the CRISPR sequence : From position
bp To position
bp