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CRISPRs details
NC_016627_4
Flanking alignement tool
Page manual
  
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NC_016627_4                                                                                                                 
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Strain :
Clostridium clariflavum DSM 19732
RefSeq :
NC_016627 (chromosome circular)
CRISPR id :
NC_016627_4
DR consensus (37 bp) :
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
Number of repetitions :
33
Begin Position :
2476251
End Position :
2478645
2476251
GTTTTTAACCTTATTTTTATGGAACATCTACTTCAAC
TGGAATTGGATTCTTGAAGAAGGTCTTGAAGATTTC
2476323
2476324
GTTTCAATCCTTATTTTTATAGAACATCTACTTCAAC
TGGGAGTATACCCCAGAAAAAACTTATGAAATAACAGA
2476398
2476399
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
TTTGGAGGGGACAATATGACGCGATACGAGAAAAGGG
2476472
2476473
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
TAGCTGATTACAGTAGCTGGTTTGAGTCTTATTTATA
2476546
2476547
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
TAGAGAATCTAGGTGTGGAGACCGCCAATAAGCTGT
2476619
2476620
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
CCCTGTGCCTGACCACGCAACCACCTCCAAACTTTA
2476692
2476693
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
AAGGTCTTCCTTTGTCGGTAAAATTATCACTGTATGCAAG
2476769
2476770
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
CATATTAGTGGAGGCATTGAAGAGCCTTGAAATTGAG
2476843
2476844
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
CAATTTATACCGAAAGTGAACGAAAAACAGCATTGTAA
2476918
2476919
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
TAATTATATTTTCACGTATATAGGTATATCTGTTCT
2476991
2476992
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
CATGTTGATTTGAGATACACTTATGTAATCCTTTGG
2477064
2477065
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
TAGATTCTCCCCGAAAAATTAAGTGTTGGGATAATG
2477137
2477138
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
TCATCATCGAGTTGCGCAAAAATCTTGATGAGTTGT
2477210
2477211
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
TAATATTTACAGTTAATCATCTACACTCACCGCCTT
2477283
2477284
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
TATCGCCAGCCACCTCAAACCGAAAGTTGTCAACTTCCG
2477359
2477360
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
ACCACATACGATCAATTTTATCTTGCCCTATAATA
2477431
2477432
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
CAATTGCGGAAGGTTTAGCGGCTTTATGGCAAGAAG
2477504
2477505
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
ATTTACTATTTGCGAAAGATTTATTTCATTTTCTC
2477576
2477577
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
ACTGTGAACTCCACGAAATCACTCAAGAAGAGTTTT
2477649
2477650
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
GGGGCTTTGGAACTACAGGAACAAATGTCGACGACT
2477722
2477723
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
TACCTAACGAATTCCCTAAGAATCCACGTTTGTTTA
2477795
2477796
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
CTGCAATTCTCTTAATTTATCTCGGATATCCATCAATGC
2477871
2477872
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
CTAGGATGCCCTCCTAGTTCTAGGCTCTGTCGTATAGCAT
2477948
2477949
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
GAAGAAGAACAAAGAAAACTTTGGGAAGATAGCAA
2478020
2478021
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
TGATGATGGAGTCTATCTGAAAATATTTGTTCAGGA
2478093
2478094
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
ACCTCTTTTGGCGGATTCTTTATGTGATGCAAGATA
2478166
2478167
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
TGAAATTGACAAAAAGCAAAAGCCAAACTGTCCAGGC
2478240
2478241
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
CTGTAACATAGCAATTGCTGACGAAATTCATGCATT
2478313
2478314
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
ATATATACACCCCCTACAAGTAGCTTGGAGCAAACT
2478386
2478387
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
CTGTCTTTCCCTCCTGATACAGAAAAGTATATATTAT
2478460
2478461
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
CTATATTTATCTATAGCTATATGTCCTGAAGCTATGGA
2478535
2478536
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
TGCAGCAACAGGCCTCAAATACTTTCAGTTATATCT
2478608
2478609
GTTTCAATCCTTATTTTTATGGAACATCTACTTCAAC
2478645
Left flanking sequence : Till position 2476251 (length
bp)
TTAAGCACCAGCTTCATTTTACACCTCCAAAAGCATTTTTTGATTTCGGAATCTGTTTGATGTATCGTCT
ACATCACTAATAGTTAATGGTATATGGACA
Right flanking sequence : From position 2478645 (length
bp)
AGCCCGTAAAGCTGTATCGCTTAAAAATTAACGCTTACAAGATTTTTTTGACGGAACTTTTTTGAGCTTC
TCCTATTATAAATCGGCAAATTCTTACATA
Print the CRISPR sequence : From position
bp To position
bp