Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_016641_7                                                                                                                 top


Strain : Paenibacillus terrae HPL-003 RefSeq :NC_016641 (chromosome circular)
CRISPR id : NC_016641_7
DR consensus (33 bp) : GTCGCACTCTGTATGAGTGCGTGGATTGAAATANumber of repetitions :7
Begin Position : 3984629 End Position : 3985066

3984629GTCGCACTCTGTATGAGTGCGTGGATTGAAATCAGCGAGACGACCAGTTTTAAGCAGCTAAATGAT 3984694
3984695GTCGCACTCTGTATGAGTGCGTGGATTGAAATATTGATTTAGAACCCGCAGAGCCGGAGATTCCAGTAAC 3984764
3984765GTCGCACTCTGTATGAGTGCGTGGATTGAAATGCCTTCCTACGCCAAATGACTGGAGGGATACACC 3984830
3984831GTCGCACTCTGTATGAGTGCGTGGATTGAAATAGATGAAGCGACCTCTACGGCCTTTTGAATACTCGT 3984898
3984899GTCGCACTCTGTATGAGTGCGTGGATTGAAATAAAAATTCCGTCAAGATTGTAGCAGACCTCATA 3984963
3984964GTCGCACTCTGTATGAGTGCGTGGATTGAAATACATACCCATCAATACTCCTTGATGGATTCGAAGCACC 3985033
3985034GTCGCACTCTGTATGAGTGTGTGGAATGAAGCG3985066
Left flanking sequence : Till position 3984629 (length bp)
TCGGTAGAAGTCAATGGTTGATTCAAGCTTTTTTGGCATCGATTTTTGCTAAAATGTATGGTATTGATAT
CATTAGAGTATGAATTGTTGCATTTTCGCT
Right flanking sequence : From position 3985066 (length bp)
ACTGAATCATATGCTCAAGAAGTAACTCAAACTCCTTAGAAGGAGATCAGTTCATACTAGGCATCTTGAC
GATTAAAAGCCGAACATCCCGCAAACCTCT
Print the CRISPR sequence : From position bp To position bp