Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_016791_1                                                                                                                 top


Strain : Clostridium sp. BNL1100 RefSeq :NC_016791 (chromosome circular)
CRISPR id : NC_016791_1
DR consensus (32 bp) : GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATNumber of repetitions :21
Begin Position : 1450296 End Position : 1451654

1450296GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATCGTAGTTGCTTGAAGGTATGAACAGTTTTACTTTGA 1450363
1450364GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATTGACATAATGCGAGACATTAGAGACGAACTTGGA 1450429
1450430GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATCATCTCATCCTCCGATTTAGCAAACATTAGCCC 1450494
1450495GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATACCTGTGAAGAATAGTGCCAATATGCCTGTAACAA 1450561
1450562GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATAGAAATTATGTAAGCGGTATTGGACACCCCAGA 1450626
1450627GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATCAGAACGTATAACAGTTCCATCATCATATATACT 1450692
1450693GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATCACTTACTACTTTTGCAATTGTACTCATATGTAAA 1450759
1450760GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATCAGTTATAACTTACAACTGACAACATAACAACAAT 1450826
1450827GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATCTCAATTAATTCAGCCATTTACACTCCCTCCCCTG 1450893
1450894GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATTGTACATTTATACCTATATACCTTTTTAAAAAAAA 1450960
1450961GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATGTCATTTGTAGCGCCTTTTGCAATTTGGCTTTTA 1451026
1451027GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATAAATACTTGCGCATTACCCTGGATCACACCCACA 1451092
1451093GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATTCGCCTTTTGACTGTTTTAGATAGCTTTGCAATAC 1451159
1451160GTCGCTCCTCTCGTAGGGGCGTGGATTGAAATATCTCTATGGATCCTGAAGACTTTGAGTATTATCT 1451226
1451227GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATAAACTGAACTCTGAATCTCTAGCTCTGGCCAAA 1451291
1451292GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATAAGTTGTCGGAGTGTTTGTTATAGCAATGCTTGC 1451357
1451358GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATTTAACTTCGATAATTAGCAGGTTATCGTTATCATC 1451424
1451425GTAGCTCCTCTCGTAGGAGCGTGGATTGAAATTTTACTATAAATAGCTACATAATGATAATTATT 1451489
1451490GTCGCTTCTCTCGTAGGAGCGTGGATTGAAATCCTCATCAACAAACGCTTGTGCTGCATCAAATAA 1451555
1451556GTCGCTCCTCTCGTAGGAGCGTGGATTGAAATACCATAACCCCAATATGTTGATATTTAATCAAATA 1451622
1451623GTCGCTCCTTTCGCAGGAGCGTGGATTGAAAT1451654
Left flanking sequence : Till position 1450296 (length bp)
TTTACTTACTTATATTTACCTTCATTTACGAATAGATTTTTAATGCTTATTTTTTGTGCAACATTAACAA
GTAGGTTTAATTATTTTGTTTATTTTTGCT
Right flanking sequence : From position 1451654 (length bp)
TCCATCGATTTTGTGCTTTTTAAACAGATTTGCAGTCGCTCCTCTAGTGGGCTAAATCCGAAATTACGAC
TATAGAACTTATTAGCTTACAGAATATACC
Print the CRISPR sequence : From position bp To position bp