Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_016863_2                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 RefSeq :NC_016863 (chromosome circular)
CRISPR id : NC_016863_2
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :4
Begin Position : 3045088 End Position : 3045300

3045088GTGTTTATCCCCGCTGGCGCGGGGAACACTCTTTTGATTTTGCTGCGATGTTATAACCAGA 3045148
3045149CGGTTTATCCCCGCTGGCGCGGGGAACACTATCCACATATACCCGCAATCATATTCAAGAA 3045209
3045210CGGTTTATCCCCGCTGGCGCGGGGAACACAATCACTGCGGGGGTATTTAGCGGAAACGGCT 3045270
3045271CGGTTTATCCCCGCTGGCGCGGGGAACAC3045299
Left flanking sequence : Till position 3045088 (length bp)
GGCGGATTGAGCGCCGTAGCCGCGATGTAGTGCGGATAATGCTGCCGTTGGTAAAAGAGCTGGCGAAGGC
GGAAAAAACGTCCTGATATGCTGGTGAAAC
Right flanking sequence : From position 3045300 (length bp)
ATCGAGTAACGTGCGCTGGAACGCGTCGGCGCGGGGAACACAATTAAAGCCGAGGGTGGCACCGCGCCTT
ATTCGGTTTATCCCCGCTGGCGCGGGGAAC
Print the CRISPR sequence : From position bp To position bp