Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_016884_2                                                                                                                 top


Strain : Sulfobacillus acidophilus DSM 10332 RefSeq :NC_016884 (chromosome circular)
CRISPR id : NC_016884_2
DR consensus (30 bp) : GTTTCAATTCCTCATAGGTAGGCTATAAACNumber of repetitions :43
Begin Position : 3246091 End Position : 3248876

3246091GGATTAAGCCGGAATACGCAGGCTATAAACGTCCCTGTCGTCATATTAGCCTGGCCGCCACTCT 3246154
3246155GTTTCAATTCCTCATAGGTAGGCTATAAACCAGCCACATGATACGATGAAGGCGCACCAAAAAA 3246218
3246219GTTTCAATTCCTCATAGGTAGGCTATAAACCCGGCAGGCGTTCTTTTTCCCGCTTGGTTAGGCGG 3246283
3246284GTTTCAATTCCTCATAGGTAGGCTATAAACCGCCTGTTGGACACATACCTGCGTGAACGGAGAGA 3246348
3246349GTTTCAATTCCTCATAGGTAGGCTATAAACGATGAGTCATCCTTCAACCACTCCCTCCAATCGCG 3246413
3246414GTTTCAATTCCTCATAGGTAGGCTATAAACCCGACTTGGTTACCGAACTGTTAGACGTGATACCG 3246478
3246479GTTTCAATTCCTCATAGGTAGGCTATAAACTCACAACAAATCACCCCACTTGCAAAATTGAACA 3246542
3246543GTTTCAATTCCTCATAGGTAGGCTATAAACTAACATCCACGGTACGGTACGCTGAAAGGGAATCTA 3246608
3246609GTTTCAATTCCTCATAGGTAGGCTATAAACCAAAATCCACCGCCAAGGGTCCGGACAGAAATTTG 3246673
3246674GTTTCAATTCCTCATAGGTAGGCTATAAACGGGATTTCTCAGCCATGTTCTGTCCTCCTTACCA 3246737
3246738GTTTCAATTCCTCATAGGTAGGCTATAAACTGTTAGCGCAGCAACAGTTCGCCGGCTGGGAAGAC 3246802
3246803GTTTCAATTCCTCATAGGTAGGCTATAAACTATGCGTTACCGACAGCGTAGATTACCACGATGCCGG 3246869
3246870GTTTCAATTCCTCATAGGTAGGCTATAAACAACAGCCGGGCAACACCGTCAATGGCACCGGGTCG 3246934
3246935GTTTCAATTCCTCATAGGTAGGCTATAAACCGCAACTCATCAACAACCCGCCGACCTGTAACGCA 3246999
3247000GTTTCAATTCCTCATAGGTAGGCTATAAACTGCATGAGCATCTATTCGCTCCTCCATATGAGGGA 3247064
3247065GTTTCAATTCCTCATAGGTAGGCTATAAACCCTACCGCTTGGCGCCAGTCGCTTGGCGCACTGT 3247128
3247129GTTTCAATTCCTCATAGGTAGGCTATAAACCATACGCCCGTGGGTTTCGTGGCGATATGCGTCAAA 3247194
3247195GTTTCAATTCCTCATAGGTAGGCTATAAACGGAAATCGCCGAAGATGCGTACTGCGCGGAACGGCAAA 3247262
3247263GTTTCAATTCCTCATAGGTAGGCTATAAACATCGGGTTCCGTGCTGTGGACGGCGTCCCGTAATCAT 3247329
3247330GTTTCAATTCCTCATAGGTAGGCTATAAACCGGTCTTTCGCTGGCAGGGCCGCCTCTACGATTAT 3247394
3247395GTTTCAATTCCTCATAGGTAGGCTATAAACTTATGCTGGGCGAAGAGGCCGGTGCCTTCATTGACG 3247460
3247461GTTTCAATTCCTCATAGGTAGGCTATAAACCGCCCCCGCTCCCCGGTGATCGGCACCACGGCGTTCA 3247527
3247528GTTTCAATTCCTCATAGGTAGGCTATAAACGCGCTCCTCGCCTTCCAACATGACCGCCTGTTTTGG 3247593
3247594GTTTCAATTCCTCATAGGTAGGCTATAAACTGGATGCGCCGCACAATCGCGGCGATTTCCTGAAT 3247658
3247659GTTTCAATTCCTCATAGGTAGGCTATAAACGGGCCTATCGGCACATTCTGACCACGTTGTCGGAT 3247723
3247724GTTTCAATTCCTCATAGGTAGGCTATAAACATCAGCGCGTTCACGACGCCTGGATGGCGGAAAAG 3247788
3247789GTTTCAATTCCTCATAGGTAGGCTATAAACTCCCCATCGTCTCGGCGATGAAGGCCCAGTAGGAA 3247853
3247854GTTTCAATTCCTCATAGGTAGGCTATAAACTGTATCTCGCACGATTAGGCGCTGTGCAACGGGTAG 3247919
3247920GTTTCAATTCCTCATAGGTAGGCTATAAACCAGCCACGGTAGGCTACGATGATAGTGAATTGAGA 3247984
3247985GTTTCAATTCCTCATAGGTAGGCTATAAACCCACTTCGAGCGAGGATAAGTGGCCCGGTTCCCA 3248048
3248049GTTTCAATTCCTCATAGGTAGGCTATAAACTCGGCTTCCGGCGAAACGGTGGGATTGGGATTGGCGG 3248115
3248116GTTTCAATTCCTCATAGGTAGGCTATAAACGCTTGGACGACCCGAATTGCCGAGGCGTGACGGATCC 3248182
3248183GTTTCAATTCCTCATAGGTAGGCTATAAACGTCGACGGGTTCCACGCTATGCCAGTCGATGGTGG 3248247
3248248GTTTCAATTCCTCATAGGTAGGCTATAAACTGGTGGCGGCGGATCCGTATTCTGACGGATTTTTAATT 3248315
3248316GTTTCAATTCCTCATAGGTAGGCTATAAACGGGGCCTTGTCCCAGCCGCCCGCGCCCCAGGGAGTG 3248381
3248382GTTTCAATTCCTCATAGGTAGGCTATAAACCCACTCGGCCGGCACGTCTGGCACGGTTTGCTCGCG 3248447
3248448GTTTCAATTCCTCATAGGTAGGCTATAAACCGGCGAAGGCCATGAGCCAGATCTACCATGATTCGGCG 3248515
3248516GTTTCAATTCCTCATAGGTAGGCTATAAACGCGAGCCAACTGCCATGATGCGGACTGACCTCCCGGG 3248582
3248583GTTTCAATTCCTCATAGGTAGGCTATAAACCTATCCCTCCTCCCATTCGCTCGGACTGGTGGCCCG 3248648
3248649GTTTCAATTCCTCATAGGTAGGCTATAAACCCAGAAAACCCGAAAAAAAGAAATGTTGACATCCG 3248713
3248714GTTTCAATTCCTCATAGGTAGGCTATAAACGTAATCATACGGCCTCACCGGCATCGCCACGTAGGAG 3248780
3248781GTTTCAATTCCTCATAGGTAGGCTATAAACTCGGCACAGAAGCCACGTTAAATGGAGCCCTAACAG 3248846
3248847GTTTCAATTCCTCATAGGTAGGCTATAAAC3248876
Left flanking sequence : Till position 3246091 (length bp)
GTATAATAGAATTTTAACTCGCCTATGGGGTGGCGATATATCGGACTACCCGGTGGCAAATTACCGGACA
CCCTGGTGGCGAATTACTGGAATACCTGGT
Right flanking sequence : From position 3248876 (length bp)
CCATTTTGCGCTGATAAATTATAGATCGTCAAGAACAGTCGTGCATACTTTTGATACTAACCGGAAATCT
AAAACCGCGGTAATGTGCTTAAAATTCTTA
Print the CRISPR sequence : From position bp To position bp