Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_016884_3                                                                                                                 top


Strain : Sulfobacillus acidophilus DSM 10332 RefSeq :NC_016884 (chromosome circular)
CRISPR id : NC_016884_3
DR consensus (30 bp) : ATTTCAATTCCTCATAGGTAGGCTATAAACNumber of repetitions :27
Begin Position : 3258232 End Position : 3259962

3258232GTTTCAATTCCTCATAGGTAGGCTATAAACAGATATTGTCATCGGGTATCCTCCTATCAGGTGG 3258295
3258296ATTTCAATTCCTCATAGGTAGGCTATAAACTGGGCATTCGTCGAATTACGATTCGCTAGCGTTACG 3258361
3258362ATTTCAATTCCTCATAGGTAGGCTATAAACAGATATTGTCATCGGGTATCCTCCTATCAGGTGG 3258425
3258426ATTTCAATTCCTCATAGGTAGGCTATAAACATCCGATTGATGTGCATATCGAGCCGGCACATGC 3258489
3258490ATTTCAATTCCTCATAGGTAGGCTATAAACTCCAGTCGTAGGCGGTTGTCCCTTGGGTTTCCAT 3258553
3258554ATTTCAATTCCTCATAGGTAGGCTATAAACTACCATGTTGACCGGTTGTTGCATAGTATCATGCTAC 3258620
3258621ATTTCAATTCCTCATAGGTAGGCTATAAACCTATTGCCGGAGTCCAGTCGTCGTCCGGCGTATCGG 3258686
3258687ATTTCAATTCCTCATAGGTAGGCTATAAACAATCTCACCCCATCGGAGTGGGAAGCCTATAACTCG 3258752
3258753ATTTCAATTCCTCATAGGTAGGCTATAAACTACCAGTGCCAGCCAACCGGAGAGCCGGCCATGAACCA 3258820
3258821ATTTCAATTCCTCATAGGTAGGCTATAAACCATCTAGCCGAAAATTGGCTGGATGTAACCTTAGA 3258885
3258886ATTTCAATTCCTCATAGGTAGGCTATAAACCGGAGGCGGCTGTGGCGATCCTCACGCTCCGCGAT 3258950
3258951ATTTCAATTCCTCATAGGTAGGCTATAAACGTCTTTTTATGGAGCGGTAATGCATGATAAGCCTGAAC 3259018
3259019ATTTCAATTCCTCATAGGTAGGCTATAAACGTTTGGGTACTTTTCCTTGCCCATGATACGAGAT 3259082
3259083ATTTCAATTCCTCATAGGTAGGCTATAAACCAAGATGCTCAGATCACGATCGGGGCCGGAGGAAATG 3259149
3259150ATTTCAATTCCTCATAGGTAGGCTATAAACGTTTGGGTACTTTTCCTTGCCCATGATACGAGAT 3259213
3259214ATTTCAATTCCTCATAGGTAGGCTATAAACGCCAGTCGCCGGCGACGATCCGGGTTCGGCCGCATACG 3259281
3259282ATTTCAATTCCTCATAGGTAGGCTATAAACGAGCGACGGCACCGGCAGCACCGGCGGGACAGGA 3259345
3259346ATTTCAATTCCTCATAGGTAGGCTATAAACGGATTTGGGTATGGACTTCCTGGTGTTCCCACTGCA 3259411
3259412ATTTCAATTCCTCATAGGTAGGCTATAAACTGGCCGAGTTACTGACGGCAGCCGACGTCAATGCAA 3259477
3259478ATTTCAATTCCTCATAGGTAGGCTATAAACCTTTCTCCTCGGGTAAGCGTTTGAACGGCTTGAA 3259541
3259542ATTTCAATTCCTCATAGGTAGGCTATAAACTAACAGTCGTATCATCGTCGATGAAGGCGGAACAA 3259606
3259607ATTTCAATTCCTCATAGGTAGGCTATAAACCGCAACCGCCTGTTGGCGCTCTAATCCGCTACGG 3259670
3259671ATTTCAATTCCTCATAGGTAGGCTATAAACACGATACGGTCGTGGTCAGTGAGGTTGTGTTCGGG 3259735
3259736ATTTCAATTCCTCATAGGTAGGCTATAAACGCATTCTTCCATGGCCCGGACAATCACGTCCATCGT 3259801
3259802ATTTCAATTCCTCATAGGTAGGCTATAAACTCGTCGGCGGCATGGGGGATCATCCACGTATACAG 3259866
3259867ATTTCAATTCCTCATAGGTAGGCTATAAACCTTGGCGATGCAGGATGACGGATGGATTCTCCGGAG 3259932
3259933ATTTCAATTCCTCATAGGTAGGCTATAAAC3259962
Left flanking sequence : Till position 3258232 (length bp)
CAAGCTGAGCGGTAATGCAAAGACCGTTATATAATTTGCCTTGAACAATCCCAATAGACAGCTATAATCG
CCAAACCTAACCCGAGTGAATACGGTCTAT
Right flanking sequence : From position 3259962 (length bp)
CCATTTTGCGCTGATAAATCACAGATCGTCAAGAACAGTCGTCCATGCTTTTAATATTAACCGGAAATCC
AAAACGGCTATTATGTGCTTATAATTCTTG
Print the CRISPR sequence : From position bp To position bp