Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017154_3                                                                                                                 top


Strain : Yersinia pestis D106004 RefSeq :NC_017154 (chromosome circular)
CRISPR id : NC_017154_3
DR consensus (28 bp) : TTTCTAAGCTGCCTGTGCGGCAGTGAACNumber of repetitions :8
Begin Position : 2768809 End Position : 2769256

2768809TTTGATTATTGCCTGTGCGGCAGTGAACTCAGGGGACTGGCGAACAATGTCTTTCATGAT 2768868
2768869TTTCTAAGCTGCCTGTGCGGCAGTGAACGAAAAGGTAAGATGGGCAAGCTTCTAGTAGTT 2768928
2768929TTTCTAAGCTGCCTGTGCAGCAGTGAACATTATCTGAATGGCATTTTCTTTGGCGCAGAT 2768988
2768989TTTCTAAGCTGCCTGTGCGGCAGTGAACTCGCCATTCCGTGAACCTGAGCGCGTTCGCGA 2769048
2769049TTTCTAAGCTGCCTGTGCGGCAGTGAACATATTCTCGAGCGATAGCAATAGCCATTCCAC 2769108
2769109TTTCTAAGCTGCCTGTGCGGCAGTGAACTCGGTCAAACAAATTTAGGCGACGATTTAACA 2769168
2769169TTTCTAAGCTGCCTGTGCGGCAGTGAACAAAAAGAATTTGGGATTAAAGTTACCCATCAG 2769228
2769229TTTCTAAGCTGCCTGTGCGGCAGTGAAC2769256
Left flanking sequence : Till position 2768809 (length bp)
AAGTCAGTAATAAAAGATGCCATTCTCCCTGTTGTCAGTTACAAAATGCGCTTCCGCTCGCAATTTTGCT
CCCCAAATAGCATCAGCACATGGCCCAGGA
Right flanking sequence : From position 2769256 (length bp)
AGTAAGATAATACGATAACATCCTGTTTGTAAAATACTTATTTCGCTAATGGGGAAAAAACCCTTTTTTT
AGACCACCGATAACCACAATGTAAAATCAA
Print the CRISPR sequence : From position bp To position bp