Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017175_14                                                                                                                 top


Strain : Clostridium difficile M68 RefSeq :NC_017175 (chromosome circular)
CRISPR id : NC_017175_14
DR consensus (26 bp) : TTTCTTTTACAGCTTCTAAACATATANumber of repetitions :4
Begin Position : 3069871 End Position : 3070113

3069871TTTGATTAACTGCTTCTAAACAAATCTCTTCTGTTTGTTCCTTTACATAAGCTAAAGCATTATAGT 3069936
3069937TTTCTCTTACTGCCTCTAAGCACATTAATTCTGTCTGACTTTCTACATATTTAAGAATTTTTCCAT 3070002
3070003TTTGCCTTACTGCTTCTATAAATATTCTTTCTGTTGGTACCTTTACATAACTTAATATTTCTTTTATTTCAAGTTCTTCAAATG 3070086
3070087AACCTCTTACTGCTTCTATACATATA3070112
Left flanking sequence : Till position 3069871 (length bp)
GTTTGATTATTTATATATTTCAACATTCTATAATCTTGTTTTACTACTTTTAGACAAACTTCTTCTGTTT
GTTCTTTCACATATTTAAGCGCTTCATAAC
Right flanking sequence : From position 3070113 (length bp)
CTTCAGTCTGTTTTTTTACGTATTGCAATACTTTTCCATTTTGTCTAACTGACTCCAAGCAAATTTCTTC
TGTTTGCTCTTTTACGTACTGTAGTGCTCT
Print the CRISPR sequence : From position bp To position bp