Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017175_15                                                                                                                 top


Strain : Clostridium difficile M68 RefSeq :NC_017175 (chromosome circular)
CRISPR id : NC_017175_15
DR consensus (26 bp) : TTTCTTTTACAGCTTCTAAACATATANumber of repetitions :4
Begin Position : 3070285 End Position : 3070509

3070285TTCTTTTTACTGCTTCCATACATATTTTTTCTGTCTGTTCATTTACATAATACAATGCAAAGTCAT 3070350
3070351TCTGTTTTACTGCTTCTATACATATTTCTTCTGTTTGCTCTTTTACACAAGATAGTGCACTGTAGT 3070416
3070417TTTCTTTTACAGCTTCTAAACATATACTATTACTTTGTTCCTTTACATAAGCTAAAGATTTTCCGT 3070482
3070483CTTTTTTTACAGCTTCTAAACATATA3070508
Left flanking sequence : Till position 3070285 (length bp)
GTTTGCTCTTTTACGTACTGTAGTGCTCTTCCATCAATTCTTACTGCTTGCAAACAAATCTCTTCTGTTT
GCTTATTTACATACTGTAGAGCCATATAAC
Right flanking sequence : From position 3070509 (length bp)
CTGGAGTTTGCTCTTTTATTCCTTTTAATATCTCTGCAACATCATTTTTAGATGCCCTTTCTATAAATGC
TAGACATACATCTTCTGTCTGCTCTTCCAC
Print the CRISPR sequence : From position bp To position bp