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CRISPRs details
NC_017177_9
Flanking alignement tool
Page manual
  
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NC_017177_9                                                                                                                 
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Strain :
Clostridium difficile BI1
RefSeq :
NC_017177 (chromosome circular)
CRISPR id :
NC_017177_9
DR consensus (23 bp) :
ATTAAACCTTAACACTATGTGTA
Number of repetitions :
3
Begin Position :
125174
End Position :
125327
125174
ATTAAACCTTAACACTATGTGTA
TTTAAACAACTTTACAGTTGGATGGCAAGAAAGTGGAAATAA
125238
125239
ATTAAACCTTAACACTATGTGTA
TTTAAACTCTGTAAAAGAGTGTTTTAAACTACTCTTGCCAAGT
125304
125305
ATTAAACCTTAACACTATGTGTA
125327
Left flanking sequence : Till position 125174 (length
bp)
TATCTATTTTCTTATTGTTAGTTGAAATAAAAAACTTAGATTAATTGAAGTTACTGTATTATAAGCATTT
CTTAATTTTAGAAATGGCTTATTTACAGCT
Right flanking sequence : From position 125327 (length
bp)
AAAAAAGAAGTTACCTATAACTTAGATAACTTCTTTTTATTTATATTATTTATTATAAATATCTACGTAG
ACTCCCATACTTCCATTTTTAATTTCTACT
Print the CRISPR sequence : From position
bp To position
bp