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CRISPRs details
NC_017278_4
Flanking alignement tool
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NC_017278_4                                                                                                                 
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Strain :
Thermus sp. CCB_US3_UF1
RefSeq :
NC_017278 (chromosome circular)
CRISPR id :
NC_017278_4
DR consensus (30 bp) :
CTTTGAACCGTACCTATAAGGGTTTGAAAC
Number of repetitions :
24
Begin Position :
268109
End Position :
269685
268109
CTTTGAACCGTACCTATAAGGGTTTGAAAC
CGTTTCCACTATTATGGCTTGGACCCGTGGGCTCGGG
268175
268176
CTTTGAACCGTACCTATAAGGGTTTGAAAC
GTGGAGAGCTTGGACCCGGGGGCGGCCGCCAGCCAC
268241
268242
CTTTGAACCGTACCTATAAGGGTTTGAAAC
TGGGGGCTATGGTATCATCGGCCCACGGGGAGAACAGG
268309
268310
CTTTGAACCGTACCTATAAGGGTTTGAAAC
CTACCACAGGCTGGATGGTACCGCTCCCGCACGGAG
268375
268376
CTTTGAACCGTACCTATAAGGGTTTGAAAC
CCTCTTCATCTTCATCCTTATCCCCCCTTTACACCCTC
268443
268444
CTTTGAACCGTACCTATAAGGGTTTGAAAC
TCGGGGAGGAGGCTTCAGAGTTCGGCATAGTGCTAAT
268510
268511
CTTTGAACCGTACCTATAAGGGTTTGAAAC
TCCTCCGAGAGGATGGCGTAGATGTGCTCCTCCCGGACCA
268580
268581
CTTTGAACCGTACCTATAAGGGTTTGAAAC
GAAGCCCAGCGTAAAAAAGAAAAATTTAAAAGCTA
268645
268646
CTTTGAACCGTACCTATAAGGGTTTGAAAC
TGCCCCCCAGGAGTTTGAGGGGGCGTGAGGTTGAGGAG
268713
268714
CTTTGAACCGTACCTATAAGGGTTTGAAAC
TAGATTAGAACTAGACCAAACTCGGTCTCCTCCTCAGA
268781
268782
CTTTGAACCGTACCTATAAGGGTTTGAAAC
TCGGGCCGAGATAAACATCAGCCCGCTCCCATTCTTCCT
268850
268851
CTTTGAACCGTACCTATAAGGGTTTGAAAC
GGAAAGGATCAAGACGGCCAAGGGGCGCAAGACCAA
268916
268917
CTTTGAACCGTACCTATAAGGGTTTGAAAC
TGGGGTCTAACTGACCCTGTACCCCCATGGTGCCACGG
268984
268985
CTTTGAACCGTACCTATAAGGGTTTGAAAC
AATGAGTTCTATGGCTTTCTCTTCCATCCTTTCACT
269050
269051
CTTTGAACCGTACCTATAAGGGTTTGAAAC
TCGTGAGGTCGGCGTACCTCGGGAGGACTAGACTAGGCTA
269120
269121
CTTTGAACCGTACCTATAAGGGTTTGAAAC
CCTAACCTGCCTAGCCTGCTTGCCTAACCCGCCTAGC
269187
269188
CTTTGAACCGTACCTATAAGGGTTTGAAAC
AAAAGATTTGGGACATGCTCCAGCAGGCTATTCAGG
269253
269254
CTTTGAACCGTACCTATAAGGGTTTGAAAC
AGCCCGCCCCCCTTTAGGGTGGACCTAGTCTGCTAGG
269320
269321
CTTTGAACCGTACCTATAAGGGTTTGAAAC
CGCTTCCCCCCTCCCGCATAAATCTTTCCCATTGCCT
269387
269388
CTTTGAACCGTACCTATAAGGGTTTGAAAC
CTGGGGGTGCGGGGAAGACCTCCCTGGCCCGGGACC
269453
269454
CTTTGAACCGTACCTATAAGGGTTTGAAAC
GGTGCGCCGCACTCCTTTCGTCTAAGAGGTCCCGCATCCG
269523
269524
CTTTGAACCATACCTATAAGGGTTTGAAAC
TCAGAAGCCAAACAACAGAAAGAACTATCATCAGGC
269589
269590
CTTTGAACCGTACCTATAAGGGTTTGAAAC
GCTGCCCGGTACACTTCTGGGCCTCGGGTGGCCCAG
269655
269656
CTTTGAACCGTACCTATAAGGGTTTGAAAT
269685
Left flanking sequence : Till position 268109 (length
bp)
GGCGCAGGTCCATCCTAAAGGGGTGGTCCCACGTTTTGACGTGTACTGAGGGGTTTGAAACTTGCCGTTC
TCCATCTTTTTCCTGCGTGGGCTCCCAATG
Right flanking sequence : From position 269685 (length
bp)
CTTGGAAGCGCTGGACCGCCCAGGGTGAGGGAGGCTGTCTTTGAACCCTACCTATGAGTTGACTGCATGG
GGGCAGGGCCTCGAGGACCTCGAGGACCCC
Print the CRISPR sequence : From position
bp To position
bp