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CRISPRs details
NC_017278_6
Flanking alignement tool
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NC_017278_6                                                                                                                 
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Strain :
Thermus sp. CCB_US3_UF1
RefSeq :
NC_017278 (chromosome circular)
CRISPR id :
NC_017278_6
DR consensus (36 bp) :
GTCGCAATCCCCTTACGGGGAAGCCACTTTTGCAAC
Number of repetitions :
10
Begin Position :
1331398
End Position :
1332116
1331398
ATTGCAATCCCCTTACGGGGAAGCCACTTTTGCAAC
TGGCTACTAGGAAGCGGGGGCAGGCTCAATCTGTTCCGCCTGA
1331476
1331477
GTCGCAATCCCCTTACGGGGAAGCCACTTTTGCAAC
CGTTGTAACTCTGCAGCTTAGAAGTTTACGGGACGA
1331548
1331549
GTCGCAATCCCCTTACGGGGAAGCCACTTTTGCAAC
GTAGGCGCTAGCCCGCTACGCGCCCCCGGGGATATCCCC
1331623
1331624
GTCGCAATCCCCTTACGGGGAAGCCACTTTTGCAAC
TCATAGCCTTAGCTAGGTACGAGTTCATCAGGTTGCGCCT
1331699
1331700
GTCGCAATCCCCTTACGGGGAAGCCACTTTTGCAAC
AAATTGTATATGTCATGATTTCCATGCCGGGGTATGATATAT
1331777
1331778
GTCGCAATCCCCTTACGAGGAAGCCACTTTTGCAAC
TACGAGACCCGCCAGGTCCCCAAGGTGGCCGGGTTCAGGTG
1331854
1331855
GTTGCAATCCCCTTACGGGGAAGCCACTTTTGCAAC
CCATGCGTGAAAAAATCCAGTTTGGGGTCAACGCCCAGCC
1331930
1331931
GTCGCAATCCCCTTACGGGGAAGCCACTTTTGCAAC
ACGCCCTCTTCAGTGAGGAGGGGGAGCCCCTCGAGGAGTT
1332006
1332007
GTCGCAATCCCCTTACGGGGAAGCCACTTTTGCAAC
TTTACGAAAGGGTCCTCCGGGCTGTTTCGGAGGAGCTT
1332080
1332081
GTCGCAATCCCCTTACGGGGAAGCCACTTTTGCAAC
1332116
Left flanking sequence : Till position 1331398 (length
bp)
CTTGCCCCAAAAGGCCAGCTTCTAGGATGGAGTTTCTTTTACAGGGAAGCCACTTGTGTCGCGGCAAAAC
CAAGACTAAGTATATCAAAAACCCAGCAGG
Right flanking sequence : From position 1332116 (length
bp)
GGTACCCCTCTCATAATCCCGTCCAGGACGGGGTTCTTAGAGGGGGGGTTTGTGAGAAAGATGAAGCTTG
GAATATACACACGCCGTATAACGGGGGTTT
Print the CRISPR sequence : From position
bp To position
bp